Gene Information

Name : PSPA7_3909 (PSPA7_3909)
Accession : YP_001349263.1
Strain : Pseudomonas aeruginosa PA7
Genome accession: NC_009656
Putative virulence/resistance : Virulence
Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 4045716 - 4047179 bp
Length : 1464 bp
Strand : -
Note : Annotation was generated automatically without manual curation; identified by match to protein family HMM PF00171

DNA sequence :
ATGCAGAACCTACTGTTCATCGACGGCCGCTTCGTCCCTGCCGTGGGCCGCGGCGAGATCGAGGTGCTGAACCCAGCCGA
CGGTTCGCCGATCACCCGCATCGCCGCCGCCGAGGCGGCCGACGTCGACCTCGCGGTGGCCGCCGCCCGGCGTGCCTTTC
CGGCCTGGGCCGGGCTGCCGGCGGCGGAGCGCGGCCGCCTGCTGCTGAAACTGGCCGATGCGATCGAGGCCAATGCCGAG
CAACTGGCCCGGCTGGAGTCCCTGGATACCGGGCACCCGCTGCGCGACTCGCGCAACCTCGATGTGCCGCGCACCGCCGC
CTGCTTCCGCTATTTCGGCGGCATCGCCGACAAGCTCGAAGGCAAGGTGATCCCGGTGGACGCGGGTTTCCTCAATTACG
TGCAGCGCAAGCCGATCGGCGTGGTCGGGCAGATCGTGCCGTGGAATTTCCCACTGATGTTCACCAGTTGGAAGCTCGGC
CCGGCGTTGGCGGCGGGCAACACGGTGGTGCTCAAGCCGTCGGAGATCACCCCGTTGTCGACCCTGCGCATCGCCGAGCT
GATCCGCGAGGTCGGTTTCCCCGACGGGGTGGTCAACATCGTGCCGGGCTATGGCAATACCGCCGGCCAGCGCCTGGCGG
AGCATCCCGACGTGGGCAAGATCGCCTTCACCGGTTCCACCCTCACCGGGCAGCGCATCGTCGAGGCCTCGCGCGGCAAT
CTCAAGCGCGTGCAACTGGAGCTGGGCGGCAAGGGCGCGAACATCGTGTTCGACGACGCCGACCTGGACGCGGCGATCAA
CGGCGCCGCCTGGGCCATCTTCCACAACCAGGGCCAGGCCTGCATCGCCGGTTCGCGGCTGATCCTCCACGAGCGCATCG
CCGACCGCTTCCTCGAACGCTTCGTCGCGCTGGCGCGCTCGATCCGCCTGGGCGACCCGCTGGATCCGGAAACCGAAATG
GGACCGCTGACCTCGGCGCTGCATCGCGACCGGGTACTGTCCTTCGCCGCGATCGCCGAGGAGGAGGGCGGGCGCATCCT
CACCGGCGGGCGGGCGCCGGGCGATCCCGCCCTGGCCGCGGGCTACTACGTCGAACCGACGGTGGTCGAGGCGCGGCCCG
AGGACCGGGTGGCCCAGGAAGAGGTGTTCGGGCCGTTCGTCACCGTCCTGCGCTTTTCCACCGAGGAGGAAGCCCTGGCC
ATCGCCAACGGCACCCGCTACGGGCTCGGCAGCGGTCTCTGGACCCGCGACCTGCAGCGGGCGCACCGGGTGGCCGGGCG
GATCCACGCGGGAATGTGCTGGATCAACTGCTACAAGCGGGTCAGCCCGGCCAGCCCGTTCGGTGGCGTCGGGCAGTCCG
GATATGGCCGCGAGATGGGCTTCGAGGCTCTGCACGAGTACACCGAGGCGCACTCGGTGTGGGTCAACGTCGACGCGAAG
ATCGCGCCGCACTACAAGCGCTGA

Protein sequence :
MQNLLFIDGRFVPAVGRGEIEVLNPADGSPITRIAAAEAADVDLAVAAARRAFPAWAGLPAAERGRLLLKLADAIEANAE
QLARLESLDTGHPLRDSRNLDVPRTAACFRYFGGIADKLEGKVIPVDAGFLNYVQRKPIGVVGQIVPWNFPLMFTSWKLG
PALAAGNTVVLKPSEITPLSTLRIAELIREVGFPDGVVNIVPGYGNTAGQRLAEHPDVGKIAFTGSTLTGQRIVEASRGN
LKRVQLELGGKGANIVFDDADLDAAINGAAWAIFHNQGQACIAGSRLILHERIADRFLERFVALARSIRLGDPLDPETEM
GPLTSALHRDRVLSFAAIAEEEGGRILTGGRAPGDPALAAGYYVEPTVVEARPEDRVAQEEVFGPFVTVLRFSTEEEALA
IANGTRYGLGSGLWTRDLQRAHRVAGRIHAGMCWINCYKRVSPASPFGGVGQSGYGREMGFEALHEYTEAHSVWVNVDAK
IAPHYKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-82 45
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 8e-77 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-79 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-79 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-79 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-79 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-79 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPA7_3909 YP_001349263.1 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase VFG0082 Protein 2e-79 43