Gene Information

Name : speL (E2348C_3937)
Accession : YP_002331399.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : secretion switching protein SpeL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4107708 - 4108763 bp
Length : 1056 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAATGGTATTGAATTTAATCAAAACCCCGCATCTGTTTTTAATTCTAATTCATTAGATTTTGAATTAGAATCTCA
GCAATTAACGCAAAAAAATTCTTCTAATACTTCTTCGCCATTAATAAATTTGCAAAATGAATTAGCAATGATTACTAGCT
CATCGCTTTCTGAAACGATTGAAGGGCTAAGCCTGGGATATCGCAAAGGTAGCGCAAGGAAAGAAGAGGAAGGCACGACA
ATCGAGAAGCTGCTCAATGAAATGCAAGAGCTGCTTACTCTTACCGATAGTGATAAAATAAAAGAACTATCATTAAAAAA
CAGCGGGTTGCTGGAACAACACGATCCTACTTTGGCGATGTTTGGCAACATGCCAAAGGGGGAAATTGTTGCGCTAATAT
CTTCTTTATTACAATCTAAATTCGTTAAGATTGAATTAAAAAAGAAATACGCCAAATTATTATTGGATTTATTAGGCGAA
GACGATTGGGAGCTGGCTCTGCTTTCCTGGTTAGGGGTGGGTGAGTTAAACCAGGAAGGTATCCAGAAGATCAAGAAGCT
TTATGAAAAGGCTAAGGATGAGGATTCTGAAAATGGCGCCTCTTTACTTGACTGGTTTATGGAGATTAAGGATCTTCCTG
AGCGTGAAAAGCACTTAAAGGTTATTATTAGGGCGCTATCGTTCGATCTGTCTTATATGTCTTCTTTTGAAGACAAGGTA
AGAACATCTTCAATTATTAGTGATTTATGTCGGATAATCATTTTTTTATCACTTAATAACTATACGGATATTATTGCAAT
CTCCATTAAGAAAGATAAAGATGTCATTTTAAATGAAATGCTATCTATTATTGAACATGTATGGTTAACAGAAGACTGGC
TACTGGAGAGCCCTTCTCGGGTATCGATTGTCGAAGATAAACATGTTTATTATTTCCATTTATTGAAAGAATTTTTTGCA
TCATTACCTGATGCTTGTTTTATTGATAACGAGCAGAGGAGTAATACATTATTAATGATTGGTAAAGTGATAGATTATAA
GGAGGATGTTATGTGA

Protein sequence : 
MANGIEFNQNPASVFNSNSLDFELESQQLTQKNSSNTSSPLINLQNELAMITSSSLSETIEGLSLGYRKGSARKEEEGTT
IEKLLNEMQELLTLTDSDKIKELSLKNSGLLEQHDPTLAMFGNMPKGEIVALISSLLQSKFVKIELKKKYAKLLLDLLGE
DDWELALLSWLGVGELNQEGIQKIKKLYEKAKDEDSENGASLLDWFMEIKDLPEREKHLKVIIRALSFDLSYMSSFEDKV
RTSSIISDLCRIIIFLSLNNYTDIIAISIKKDKDVILNEMLSIIEHVWLTEDWLLESPSRVSIVEDKHVYYFHLLKEFFA
SLPDACFIDNEQRSNTLLMIGKVIDYKEDVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sepL AAC38393.1 SepL Virulence LEE Protein 2e-134 100
sepL CAI43863.1 SepL protein Virulence LEE Protein 2e-128 95
sepL YP_003236077.1 secretion switching protein SepL Not tested LEE Protein 1e-125 95
sepL CAC81873.1 SepL protein Not tested LEE II Protein 6e-129 95
sepL YP_003223464.1 secretion switching protein SepL Virulence LEE Protein 2e-128 95
sepL AAK26726.1 SepL Virulence LEE Protein 3e-129 95
sepL YP_003232164.1 secretion switching protein SepL Not tested LEE Protein 4e-129 95
sepL AAL57553.1 SepL Virulence LEE Protein 3e-129 95
sepL NP_290257.1 hypothetical protein Virulence LEE Protein 5e-131 95
sepL AAC31502.1 L0023 Virulence LEE Protein 4e-131 95
ECs4557 NP_312584.1 SepL Virulence LEE Protein 5e-131 95
speL ACU09447.1 secretion switching protein SpeL Virulence LEE Protein 4e-131 95
unnamed AAL06380.1 SepL Virulence LEE Protein 2e-125 91
sepL AFO66306.1 putative LEE-encoded type III secretion system component Virulence SESS LEE Protein 6e-90 72
sepL AFO66390.1 putative LEE-encoded type III secretion system component Virulence SESS LEE Protein 6e-90 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
speL YP_002331399.1 secretion switching protein SpeL VFG0741 Protein 9e-135 100
speL YP_002331399.1 secretion switching protein SpeL VFG0801 Protein 2e-131 95