Gene Information

Name : map (E2348C_3942)
Accession : YP_002331404.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : LEE-encoded effector Map
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4115809 - 4116420 bp
Length : 612 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAGTCCAACGGCAATGGTAGGTAGAGCGTTAGCTCAGGCGGTTACACAAACTCTTAGACCCGCTGTAACCAAGGC
TGCGACGCAAGCGGGCATGGCAGCCAGTGGTATGAGGTTCACACCTATGCAGTCGAACCTTATGATTAATCATGGCAAAC
TGACTACCCAGCTACTACAGGCCGTAGCCAAACAAACTGGTAGTAGTGATACCCAGCAATGGTTCAAGCAAGAGCAGATT
ACTTTTCTATCCAGAGCAGTAAACAAAACTGTGGATGACTATTGCATGAGTAATAATTCGGCAATTAGTAAGGAGACTAA
ATGTCGCATTTTTAAAGAGGTTGAAAGCGCGATACAACAGCCTCTCGATATGAACTGTGCACAATCATCAATTAGTCACT
TTTTGCAATCCAATAAATACTTTAATCAGAAAGTTGATGAGCAGTGTGGTAAAGGAGTGGATCCCATTACACGTTTTAAC
ACTCAAACCAAATTGATAGAACAAGTCTCACGCGAAATCTTTGAACAGAATTTTAGCACCGCGAAAATCAGTGATATCAA
GGCTCTAACTGAGAAGGCGATTGCAGACAATGTGCAGGATACTCGGCTGTAG

Protein sequence :
MFSPTAMVGRALAQAVTQTLRPAVTKAATQAGMAASGMRFTPMQSNLMINHGKLTTQLLQAVAKQTGSSDTQQWFKQEQI
TFLSRAVNKTVDDYCMSNNSAISKETKCRIFKEVESAIQQPLDMNCAQSSISHFLQSNKYFNQKVDEQCGKGVDPITRFN
TQTKLIEQVSREIFEQNFSTAKISDIKALTEKAIADNVQDTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC38389.1 Orf19 Not tested LEE Protein 2e-91 100
map YP_003236082.1 T3SS secreted effector Map Virulence LEE Protein 9e-86 92
unnamed AAK26721.1 unknown Not tested LEE Protein 5e-79 80
map YP_003223469.1 T3SS effector Map Virulence LEE Protein 3e-78 80
unnamed AAL57548.1 unknown Not tested LEE Protein 5e-79 80
map YP_003232159.1 T3SS effector Map Virulence LEE Protein 7e-79 80
st30 CAC81868.1 ST30 protein Not tested LEE II Protein 5e-79 80
unnamed AAL06375.1 unknown Virulence LEE Protein 8e-76 80
unnamed CAI43868.1 hypothetical protein Not tested LEE Protein 2e-78 80
ECs4562 NP_312589.1 hypothetical protein Not tested LEE Protein 4e-71 75
unnamed AAC31507.1 L0028 Not tested LEE Protein 2e-71 75
unnamed ACU09452.1 IpaB/EvcA family protein Not tested LEE Protein 2e-71 75
Z5113 NP_290262.1 hypothetical protein Not tested LEE Protein 4e-71 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
map YP_002331404.1 LEE-encoded effector Map VFG0736 Protein 1e-91 100
map YP_002331404.1 LEE-encoded effector Map VFG0806 Protein 1e-71 75