Gene Information

Name : E2348C_3946 (E2348C_3946)
Accession : YP_002331408.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4118676 - 4119092 bp
Length : 417 bp
Strand : -
Note : -

DNA sequence :
TTGACTAGAGTTTCTCTAAAAAGAAATTTGATAGAGCCTGTTTCTTTTCGGCCATCAGATGATTGGCCGCAAGGAGAAGA
AAGTTTTAATGATATTTTTTATCATATAAAAAAAAGATCGCCTGATACGTTGTTCATACGAATGGCTTCTTTATGGAAGA
GATTGTTTTACTCCTCGGGCCGAAGACGACGCTACTTTGAAGAAGGGGAGCACTCGTTTAGTATTCTTTGTGGAAGATTA
CGAGGAGTTGTTTTAACAATTAAATGTAGTAACGGAATCATTTATCTGTCTATTAAAATAAGCCAAAATAATAGAAATCA
TGTTTTTTTATATCATAAAAAAGACTATGTTTTCGATAAGTTAAAAGAAATCTTTCCTGATGAAGCCATTGAGTTCACAA
TTGAATATGAAAATTAA

Protein sequence :
MTRVSLKRNLIEPVSFRPSDDWPQGEESFNDIFYHIKKRSPDTLFIRMASLWKRLFYSSGRRRRYFEEGEHSFSILCGRL
RGVVLTIKCSNGIIYLSIKISQNNRNHVFLYHKKDYVFDKLKEIFPDEAIEFTIEYEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC38385.1 Orf16 Not tested LEE Protein 1e-61 100
unnamed ACU09456.1 conserved hypothetical protein Not tested LEE Protein 4e-61 98
ECs4566 NP_312593.1 hypothetical protein Not tested LEE Protein 6e-61 98
ECO111_3750 YP_003236086.1 putative T3SS component protein Virulence LEE Protein 2e-59 95
ECO103_3616 YP_003223473.1 T3SS component Virulence LEE Protein 5e-53 81
ECO26_5273 YP_003232155.1 T3SS component protein Virulence LEE Protein 5e-53 81
unnamed AAK26717.1 unknown Not tested LEE Protein 5e-53 80
unnamed AAL06371.1 unknown Not tested LEE Protein 7e-38 77

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
E2348C_3946 YP_002331408.1 hypothetical protein VFG0732 Protein 5e-62 100