Gene Information

Name : Sputcn32_0397 (Sputcn32_0397)
Accession : YP_001181928.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 430657 - 431334 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4428 DNA-binding response regulator

DNA sequence : 
ATGAAAATACTTTTAGTTGAAGATGATGCGACGACGATTGATTACATCGTCAAAGGATTTCTTGAGCAGGGGCACAATAT
CGAAACGGCGAATGATGGCCACCAAGGTTTATCTCTCGCCACAAGCTGTCAATATGATCTGGTGATCCTCGACCGAATGT
TACCCCAGCTTGATGGCTTAAAATTATTGGCGGCTTTAAGGGCAACGGGTAATCAAACCCCTGTGCTGATTTTGTCGGCT
TTAGCCCATGTTGATGAACGGGTTAAAGGTTTGCGGGCGGGCGGTGATGACTATATGACTAAGCCGTTTGCTTTTTCTGA
ACTGTTAGTACGCGCTGAAAAACTGATGCAACGTGGTCAATCCACGCCCATTTCGACCGACTTAGTGGTTGGTGGGCTCA
AGATGGAATTACTGACCCGCAATGTGACCTTGGACGGACAGGAGTTAATGTTGCAACCTAAAGAGTTTCAGTTGCTTAAG
TATTTGATGGAACATGCTAATCAGGTCATCAGCCGCACACTATTATTTGAAGCTGTGTGGGATTATCACTTTGACCCTCG
CACCAATGTAATTGATGTACATATTGCAAAATTACGGCGTAAATTTGAGGAGTTAGGTCACGGAGAGCTGATTGAAACCG
TAAGGGGAGCGGGTTATCGCTTACGCCAAAGGCATTAA

Protein sequence : 
MKILLVEDDATTIDYIVKGFLEQGHNIETANDGHQGLSLATSCQYDLVILDRMLPQLDGLKLLAALRATGNQTPVLILSA
LAHVDERVKGLRAGGDDYMTKPFAFSELLVRAEKLMQRGQSTPISTDLVVGGLKMELLTRNVTLDGQELMLQPKEFQLLK
YLMEHANQVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEELGHGELIETVRGAGYRLRQRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-41 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0347 Protein 5e-45 44
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0083 Protein 2e-41 44
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0197 Protein 1e-39 43
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0111 Protein 3e-47 43
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0638 Protein 2e-38 43
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0308 Protein 1e-42 42
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator BAC0125 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator VFG0596 Protein 4e-42 45
Sputcn32_0397 YP_001181928.1 two component transcriptional regulator VFG1389 Protein 7e-36 45