Gene Information

Name : Desor_4069 (Desor_4069)
Accession : YP_004972026.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4195717 - 4196391 bp
Length : 675 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAGTTCGAAAATCCTAATCATCGAAGATGAAGAAAAAATAGCTCGCTTTGTCGAGCTGGAACTTGGCTATGAAGGCTA
TACGACTACCAAAGCCTTTGATGGCCGAACAGGGCTTGAACTCGCCGAAACCGGCGAGTTCGACCTTATTTTATTGGATA
TCATGCTGCCCCAGTTAAGCGGCATGGAAGTGCTGCGCAGAATCCGCCGGGTTTCTTCCGTTCCGGTCATCATGTTGACA
GCACGGGACAGCGTCATGGACAAAGTTTTCGGCTTGGACAGCGGCGCAAGCGATTACATCACCAAGCCCTTTGCCATTGA
AGAACTTCTCGCCCGCATCCGCAATGCTCTCAGAAAAACTTCACAAGAAGGAACCGTACTGTCTGCTTCCGGCCTGCTGA
TGGATACGGGGCGTCATGTGGTCACAGTGCAGGGTACCCCTATCGACTTAACCAAACGGGAATTTGATCTCCTTCACTAT
TTGCTGAAACACAAAGGCTTAGTTGTTTCTCGAGAAACACTCCTGGAAAATGTATGGGGTTTTGATTTTTCGGGAGAAAC
TAACGCTGTTGATGTTTACATACGATTTCTGCGCGGAAAAATTGATGAAGTGTTTGATATTAAGTTAATTCACACCGTAA
GAGGAGTGGGGTATGTGATTAAGGATGAAAAGTGA

Protein sequence :
MSSKILIIEDEEKIARFVELELGYEGYTTTKAFDGRTGLELAETGEFDLILLDIMLPQLSGMEVLRRIRRVSSVPVIMLT
ARDSVMDKVFGLDSGASDYITKPFAIEELLARIRNALRKTSQEGTVLSASGLLMDTGRHVVTVQGTPIDLTKREFDLLHY
LLKHKGLVVSRETLLENVWGFDFSGETNAVDVYIRFLRGKIDEVFDIKLIHTVRGVGYVIKDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-42 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-42 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-45 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 6e-44 51
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-43 50
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 9e-40 48
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 2e-39 48
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 5e-39 45
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 9e-38 43
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 1e-33 43
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-35 43
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 1e-33 43
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 2e-36 43
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 2e-27 42
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 5e-36 41
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 3e-31 41
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 1e-30 41
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 4e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 8e-43 50
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 3e-33 44
Desor_4069 YP_004972026.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-37 42