Gene Information

Name : Mpop_0406 (Mpop_0406)
Accession : YP_001923119.1
Strain : Methylobacterium populi BJ001
Genome accession: NC_010725
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 437852 - 438550 bp
Length : 699 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver

DNA sequence : 
ATGCGCCTGCTCATCATCGAGGACGACCGCGAGGCCGCCGCCTATCTGGTCAAAGCGTTCCGGGAAGCCGGGCACGCCGT
GGACCATGCGGGCGACGGCCTCGACGGCTACGCGCTCGCCCGCGAGGGCGATTACGACGTGCTGATCGTCGACCGTATGC
TGCCGAAGCTCGACGGTCTCTCCCTGGTGCGCTCACTGCGCGAGCAGGAGATCGCCACGCCCGTCCTCATCCTCTCGGCA
CTCGGCCAGGTGGACGACCGGGTGAAGGGCCTGCGCGCGGGCGGCGACGATTACCTGCCCAAACCCTACGCCTTCTCCGA
ACTCCTGGCCCGCACCGAGGTGCTGGCCCGCCGCCGCGCGGCTGCGACCGGCCAGAGCGAGGCCACCGCCTACCGCGTCG
GCGACCTCGAACTCGACCGGCTCTCGCACCGGGTGACGCGGGCGGGCCGCGAGATCGTGCTGCAGCCCCGCGAGTTCCGG
CTGCTCGAATACCTCATGCGCCATGCCGGGCAGGTCGTGACCCGCACGATGCTGCTGGAGCATGTCTGGGACTATCACTT
CGATCCGCAGACCAACGTCATCGACGTGCACGTCTCCCGGCTGCGCTCGAAGATCGACCGCGGCTTCGAGCACCCGATGA
TCCACACGGTCCGCGGCGCGGGCTACGTCATCCGGCCGGACGAGCCGCAAGCCTCGTGA

Protein sequence : 
MRLLIIEDDREAAAYLVKAFREAGHAVDHAGDGLDGYALAREGDYDVLIVDRMLPKLDGLSLVRSLREQEIATPVLILSA
LGQVDDRVKGLRAGGDDYLPKPYAFSELLARTEVLARRRAAATGQSEATAYRVGDLELDRLSHRVTRAGREIVLQPREFR
LLEYLMRHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHVSRLRSKIDRGFEHPMIHTVRGAGYVIRPDEPQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0111 Protein 3e-57 50
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0125 Protein 6e-49 48
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0083 Protein 2e-48 47
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0347 Protein 5e-50 46
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0308 Protein 7e-44 46
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0197 Protein 1e-42 46
Mpop_0406 YP_001923119.1 transcriptional regulator BAC0638 Protein 3e-40 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_0406 YP_001923119.1 transcriptional regulator VFG1389 Protein 2e-35 43
Mpop_0406 YP_001923119.1 transcriptional regulator VFG1390 Protein 2e-40 42
Mpop_0406 YP_001923119.1 transcriptional regulator VFG0596 Protein 1e-40 41