Gene Information

Name : S58_41550 (S58_41550)
Accession : YP_007513728.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4728508 - 4729995 bp
Length : 1488 bp
Strand : -
Note : -

DNA sequence :
ATGTCGATTGCATATGACTACGAGCGCGGCTCGAGGACGACGTCTTATCTCACGAAGCCGTTGCAGCTCCTGATCGGCGG
CCGGCATGTTCCCTCGGTTTCGGGACGCACCTTCACGTCGCTCAATCCTGCAACCGAGCAGGCGATTGCGACGGTCGCGG
AGGGCAATGCCGAGGATGTCGATTTCGCGGTCGCTGCGGCCCGCAAGGCCTTCGAAGGGCCGTGGCGGACGATGCGTGCA
GCGGAGCGTGGCACGATCCTGCTGAAATGGGCGCAGCTGTTGCGCGACCATGCCGACGAGATCATCGAGCTCGAAAGCCT
CGATGCCGGCAAGCCCGTGTCCGCGATCCTGCGCCAGGATCTTCCCGCCGCCATCGATACGCTCACCTATTACGCCGGAT
GGGCCGACAAGATCAGCGGTGAAGTCGTCTCCACGCGCGATGATGCCCTGACCTACACGGTGCGCGAGCCGGTCGGCGTG
GTCGCCGCGATCGTGCCGTGGAACTTCCCGCTGATGATCGGGATGTGGAAGCTCGCACCGGCGCTGGCGTGCGGCTGCAC
CGTGGTGATGAAGCCCGCCGAGCTGACGTCGATCTCGGCGCTGCGGATCGGCGAGCTTGCACTCGAAGCCGGTCTGCCGC
CCGGCGTTCTCAACATCGTGACCGGTCCCGGGCGCACGGTCGGCGAGGCGCTGGTCAATCATCCCGACGTCGACAAGGTC
ACGTTCACCGGCTCGCCCGGCGTCGGCCGCGGCATCATGAAGGGCGCGGCCGGCAACTTCAAACGCGTCTCGCTCGAGCT
CGGCGGCAAGTCTGCCAACATCATCTTCGACGACGCGAACATCGAGGCGGCGTCGAAAGCCGCGGCCAGCGGCATCTTCT
TCAACACCGGGCAGGTGTGCTCGGCCGGCTCGCGCGTGCTGGTGCAGGAGCGTGTCTATGACGAGGTGGTCGAGCGCCTG
ACCGAGCGCGCACGGGCGCTGCGGATCGGCGATCCACTCGATCGTGCCACCTCGCTCGGACCCGTCATTTCAGAACGGCA
GATGAAATCGATCCTCGACTACGTCGACATCGGACGCAACGAAGGCGCCACGCTCGTTACCGGCGGCCAGCGCGCGGCGG
CCCGCGGTTATTTCATCAGCCCTGCCGTCTTCGCCGGCGTCACGCACGACATGCGGATCTCGCAGGAGGAGATCTTCGGA
CCCGTGGTCAGCGTGATCAAGTTCAAGGACGAGGCCGATGCGCTGCGCATGGCCAACGGCACGGCCTACAGCCTGGCCGC
CGGCGTCTGGAGCAGCGACTTCGGCCGCGTCCAGCGCTTCGCCAAGCGCCTGCGCGCGGGCACGGTGTGGATCAACACCT
ACGGCTACACCGATGTCCGGCTGCCCTGGGGCGGCGATCGCGACTCCGGACTGGGCCGCGAGCACGGAACGGCCGCGCTG
GCCAATTTCACCGAGCCGAAGGCCGTCTGGATGAACCTCGCGGTGTGA

Protein sequence :
MSIAYDYERGSRTTSYLTKPLQLLIGGRHVPSVSGRTFTSLNPATEQAIATVAEGNAEDVDFAVAAARKAFEGPWRTMRA
AERGTILLKWAQLLRDHADEIIELESLDAGKPVSAILRQDLPAAIDTLTYYAGWADKISGEVVSTRDDALTYTVREPVGV
VAAIVPWNFPLMIGMWKLAPALACGCTVVMKPAELTSISALRIGELALEAGLPPGVLNIVTGPGRTVGEALVNHPDVDKV
TFTGSPGVGRGIMKGAAGNFKRVSLELGGKSANIIFDDANIEAASKAAASGIFFNTGQVCSAGSRVLVQERVYDEVVERL
TERARALRIGDPLDRATSLGPVISERQMKSILDYVDIGRNEGATLVTGGQRAAARGYFISPAVFAGVTHDMRISQEEIFG
PVVSVIKFKDEADALRMANGTAYSLAAGVWSSDFGRVQRFAKRLRAGTVWINTYGYTDVRLPWGGDRDSGLGREHGTAAL
ANFTEPKAVWMNLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-86 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-83 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-85 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-86 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-86 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-86 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-85 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_41550 YP_007513728.1 aldehyde dehydrogenase VFG0082 Protein 8e-86 41