Gene Information

Name : Desaci_4199 (Desaci_4199)
Accession : YP_006468390.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4350397 - 4351092 bp
Length : 696 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCAGGAAACAATTCTCAAAGTATTATTAGTTGAAGATGACCGTGCTATTGCTAAAGTCATAGCGTTGGAATTAGAACA
TCATGGACATAGTGTTGTATTGGCAGCGGAGGGAAGGATGGGGCTTGATATGGCCTTAACGCAGGAATGGGATGTCATCC
TTTTGGACCTTATGCTGCCTTTTCTCAATGGCTATGAAATTTGCAAACAAATACGAGCACGCAAAGATACCCCAATTCTG
CTCTTGACTGCGAAAGATGAAGTTCAGGATAAAGTCTTTGGTTTGGATATTGGCGCCGATGATTATTTGACAAAACCTTT
TGCCATGGATGAATTAATGGCTCGGATTCGCGCCGTATTACGGCGTAAAAATCCGCCGGTTAAGAAAAATTTAGGCCAAT
TAACCTTTCGGGAACTTGAACTTGATACCCAAGCCTATCAAGTTTATTTTCGAGGTGAGGAAATTAGTTTGACCAAAAAG
GAATTTGAACTATTGACCATGTTTTTAGAGCATCCGAACCGAGTTTTGTCACGGGAGCATATTCTGGAAAACGTTTGGGG
GTTCGATTTTTATGGGGAATCGAATGCCGTTGATGTATATGTGCGCTTTTTACGCGGCAAGATTGACGAACGCTTTGGAG
TTCATTACTTTCATACGGTGAGGGGAGTGGGCTATGTCCTGCGAGCCGAAGACTAG

Protein sequence :
MQETILKVLLVEDDRAIAKVIALELEHHGHSVVLAAEGRMGLDMALTQEWDVILLDLMLPFLNGYEICKQIRARKDTPIL
LLTAKDEVQDKVFGLDIGADDYLTKPFAMDELMARIRAVLRRKNPPVKKNLGQLTFRELELDTQAYQVYFRGEEISLTKK
EFELLTMFLEHPNRVLSREHILENVWGFDFYGESNAVDVYVRFLRGKIDERFGVHYFHTVRGVGYVLRAED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 8e-48 50
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-43 48
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 2e-44 47
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 4e-44 46
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 1e-39 44
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 7e-38 44
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 1e-41 44
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-33 43
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 2e-37 43
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 5e-36 42
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-42 42
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 5e-29 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 4e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 3e-39 41
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 4e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-48 49
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-39 42
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-38 42
Desaci_4199 YP_006468390.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 5e-38 41