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Name : YpsIP31758_0408 (YpsIP31758_0408) Accession : YP_001399401.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : insecticidal toxin complex protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 476199 - 478931 bp Length : 2733 bp Strand : - Note : identified by match to protein family HMM TIGR01643 DNA sequence : ATGTCCCCAAGTTTACTAACCCAGCTTTGCACCAACACCCCCAGTATTGCCGTTCACGATAACCGGGGGTTAGCCATTCG CACACTGGCTTATAACCGCCGCAGTCATAATGAAACCGTTGACGAACTGAGCAGCCGCAACCGCTATAACGCCTCCGGTC AGCTAATCGCCAGCCGCGACCCGCGCCTTGAGGTGGATAATTTTCGCTATCAATACAGCCTCAGCGGTGTTCCACTGCGT ACCGACAGCGTCGATAGCGGCAGTACGCTGCAACTGGCAGATAGTGCTGGCCGCACGGTGCTCACGCGGGATGCACACCA CACCCGCCGCTGGGTAGAGTATGAGACCGGTGAGCACAGTTTAGGCCGCCCACTAAGTTACCGCGAGCAAGCCAAAGGCG GCCTGAAAACGGTTACCGACCGCTTTTTCTATGGCGAAAATAGCGAGCAGGATAAAGGCTGCAATCTGAACGGCCAGTGT GTCCGCCATTACGACAGCGCCGGTTTACAGGCACTGATTAGCCAGTCGATTATTGGCGTGCCATTGCAGCAACAGCGCCG TCTGTTGACGGATATCAAAGGCCCGGTTGACTGGTTTGGCGAGAAGGAGAACTGGGGCGTTCGCCTGAGTGAATCGCCGT TTGTTAGCCATTGCACCACCAATGCTCTCGGCCAGTTAATCACGCAAACCGATGCCAAAGGCCATATCCAGCGCATGGCC TATAACCGTGCCGGACAGCTTATCGGTTCGTGGTTAACGGTAAAAAATGGCATGGAGCAGCCCATTGTATACTCACTCAC CTATTCGGCTGCTGGGCAAAAACTGCGCGAAGAGAGCGGCAACGGGGTCATTACCGAATACCGTTATGAGCCGCAAACCC AGCGTTTAATCGGCATTAAAACCACCCGTCCGGCGAAGAAAGACCGCCCGACCCGGTTACAAGACCTGCGTTACGATTAT GACCCGGTCGGGAATATTCTCGCCATCCATAACGACGCCGAAGCCACCCGCTTCTACCGTAATCAGAAAATCGTGCCGGA AACCACTTACCGCTACGATGCACTGTATCAGCTTATCGAGGCCACTGGCCGTGAAGCCGATACCAACGGCATACAAAACA GCCAGTTACCCGCGCTGGCGTTACTGAACGACAGCAACCAGTTCGTCAATTACACCCGCCACTACCACTATGACCGCGCC GGTAACCTGCTAAAAATTCAGCACACAGGAGCCAGCCAATACAGTACCTATATCACGGTGTCCGATTCGTCCAATCATGG CATTCAGCAACAAGATGGCATCACCGCCCATGATGTCCGCTCCCAGTTTGATGCGGCGGGTAATCAGCGACAACTGCAAC CCGGTCAACTCCTTCACTGGAACAGCCGCAATCAGTTACAGCAAGTGGAGCCCGTGCCCCGCAACGACGGCATCAGTGAC AGCGAAAACTATCTCTATGATGGCAGCGGTAGCCGGGTGGTCAAAATCAGTCTCCATAAAACCCATAACGCCATCCAAAC CCGTTCAGTCATTTATTTAGCGGGACTGGAACTGCGTAGCCAATATAATGGCAATAATCTGACAGAAGATTTTCAGGTGA TGACCGTGGGTGCCGCGGGCCGTGCTCAGGTACGGGTATTACACTGGGAGCGCGGCCAACCCGCTGATATCGTCAATGAC CAACTGCGTTACAGTTTCGATAACCACATTGGCTCGGCGTTAATCGAATTAGACAGCGACGGCGATATTATCAGCCAGGA AGAATATTACCCATTTGGCGGCACCGCGGTGTTAGCCTCCCGTAATACCATGGAAGCTAAATATAAAACCGTTCGTTACT CCGGTAAAGAGCGTGACACCACCGGACTGTATTATTACGGTTACCGTTATTACCAGCCATGGCTGGGCCGATGGTTAAGC GCCGACCCCGCAGGCACTATAGACGGGCTGAATTTATACCGAATGGTGAGGAATAACCCAGTGGGGTTAATGGATGGGGA TGGAAGAGCCCCGATTGTATTAAATGAATCAATTGAAAAAGAAGAGGAAACAAAAGAAACAAAAGAAACAAAAGAAACAA AAGAAACTGAAAAAATAACCGCTATATCTAGCCATGCTATTAACAATATATCACCGACAGAACCGAGGGAAACCATCACT GCTCACACACTATTAACATCAGAACCTACTTATACGCCGCATGCCGTTTATGATCGAGAAAAAAGAAAAAAACGCGATTT AGTAAAACATATCTATGAAATAAGTGAACCTAAGTCATACAATTGCTTTACTCGTGCCAAAGCTATTTTTTTATCAGTAA GAGACAGTAAAATAACAGTGCCAACAAGTAATGTACTTTTATTTAATCACCATCTTTCCAATAAGTTAGAACTACAAGAA AGCAATTGGATGAAAAAAGAAGAAATCCCTTCATTTATTGCATCCAATGATGAGAAAATAAATAATTATATTATCAGAGG TAAAATAAGGGAAGAGGCCGGACCGTCATTATTTAATCCTGGCCGTTATTTTGGTCATTTCTTTAACATAGCTGATATGG GGAGTGGATGGACAGTTATGGATGCTTATTTTGACTATAGTGGTAAAAACTTCTTCCACTGGCTTGCAAATAAAACAACC CTTGAAAATGAAGAGATATATTCTAAATTTAAACTCTATTATCCAAAGGTAAAATCCCAAAATTCATTACAAAAAAACAA TTCTGATCTTTAA Protein sequence : MSPSLLTQLCTNTPSIAVHDNRGLAIRTLAYNRRSHNETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR TDSVDSGSTLQLADSAGRTVLTRDAHHTRRWVEYETGEHSLGRPLSYREQAKGGLKTVTDRFFYGENSEQDKGCNLNGQC VRHYDSAGLQALISQSIIGVPLQQQRRLLTDIKGPVDWFGEKENWGVRLSESPFVSHCTTNALGQLITQTDAKGHIQRMA YNRAGQLIGSWLTVKNGMEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDY DPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPALALLNDSNQFVNYTRHYHYDRA GNLLKIQHTGASQYSTYITVSDSSNHGIQQQDGITAHDVRSQFDAAGNQRQLQPGQLLHWNSRNQLQQVEPVPRNDGISD SENYLYDGSGSRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVND QLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTMEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLS ADPAGTIDGLNLYRMVRNNPVGLMDGDGRAPIVLNESIEKEEETKETKETKETKETEKITAISSHAINNISPTEPRETIT AHTLLTSEPTYTPHAVYDREKRKKRDLVKHIYEISEPKSYNCFTRAKAIFLSVRDSKITVPTSNVLLFNHHLSNKLELQE SNWMKKEEIPSFIASNDEKINNYIIRGKIREEAGPSLFNPGRYFGHFFNIADMGSGWTVMDAYFDYSGKNFFHWLANKTT LENEEIYSKFKLYYPKVKSQNSLQKNNSDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC2 | AAL18492.2 | TccC2 | Virulence | tcd island | Protein | 1e-153 | 55 |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 2e-155 | 55 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 3e-152 | 54 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 8e-155 | 54 |
