Gene Information

Name : yedW (CTU_41030)
Accession : YP_003212466.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein YedW
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4266024 - 4266704 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGAAACTGCTGCTGATTGAAGACAACGATAAAACCCGCGCGTGGCTCGAAAAAGGGTTGCGGGAGGCGGGGCTGGTGGT
GGACGCCGTCGCCGACGGGCGCGATGGCCTGCATCTGGCGCTGGAGCACGACTACGCGCTGATCATCCTCGATATCATGC
TGCCGGGCCTCGACGGCTGGCAGGTATTACGCGCGCTGCGCACCGCCAAAGCGACGCCGGTGCTCTGCCTGACGGCCAGA
GATGCGGTAAGCGATCGCGTGAAAGGGCTGGAGCTGGGGGCCGATGATTACCTGGTGAAGCCCTTTTCTTTCGCCGAACT
GCTGGCGCGCGTGCGGGCGCAATTGCGTCGTCATACGCCTGCCGCCGCGACGCTGCAGGTGGCGGATCTGACGCTTGATA
CCGCGCGCCACGCCGCCAGCCGCGGCGGCGAGCGGATCGCGTTAACCCGTCAGGAATTTACCCTGCTGTGGCTGCTGGCA
AGCCGCGTCGGAGAAATTCTGCCGCGCACGCTGATTGCCAGCGAAGTCTGGGGTATTAATTTCGACAGCGAAACCAACGT
GGTGGATGTCGCCATCCGTCGCCTGCGCAAAAAAATCGACGATCCGTTCCCGCTTAAGCTGATTGAAACCGTGCGCGGCA
TGGGATACCGCCTCAACGCGCCGGAGCAGAGCGATGCGTAG

Protein sequence :
MKLLLIEDNDKTRAWLEKGLREAGLVVDAVADGRDGLHLALEHDYALIILDIMLPGLDGWQVLRALRTAKATPVLCLTAR
DAVSDRVKGLELGADDYLVKPFSFAELLARVRAQLRRHTPAAATLQVADLTLDTARHAASRGGERIALTRQEFTLLWLLA
SRVGEILPRTLIASEVWGINFDSETNVVDVAIRRLRKKIDDPFPLKLIETVRGMGYRLNAPEQSDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-77 73
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-76 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0197 Protein 2e-61 61
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0125 Protein 4e-62 61
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0083 Protein 5e-62 60
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0111 Protein 1e-60 58
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0308 Protein 6e-56 57
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0638 Protein 9e-56 57
yedW YP_003212466.1 transcriptional regulatory protein YedW BAC0347 Protein 5e-55 54
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_007793.3914065.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_007622.3794948.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_002951.3238224.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_002952.2859858.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_013450.8614146.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_010079.5776364.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_003923.1003417.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW NC_002758.1121390.p0 Protein 2e-41 45
yedW YP_003212466.1 transcriptional regulatory protein YedW AE015929.1.gene1106. Protein 3e-35 43
yedW YP_003212466.1 transcriptional regulatory protein YedW CP001918.1.gene5135. Protein 3e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yedW YP_003212466.1 transcriptional regulatory protein YedW VFG0596 Protein 2e-77 73
yedW YP_003212466.1 transcriptional regulatory protein YedW VFG1389 Protein 2e-34 45
yedW YP_003212466.1 transcriptional regulatory protein YedW VFG1390 Protein 6e-38 44
yedW YP_003212466.1 transcriptional regulatory protein YedW VFG0473 Protein 8e-32 41