Gene Information

Name : ESA_04253 (ESA_04253)
Accession : YP_001440269.1
Strain : Cronobacter sakazakii ATCC BAA-894
Genome accession: NC_009778
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4219097 - 4219777 bp
Length : 681 bp
Strand : +
Note : KEGG: rha:RHA1_ro05622 1.9e-41 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGCAGCGTATTTTAATCGTTGAAGACGAACAAAAAACAGGTCGTTACCTGCAGCAGGGACTGGTTGAGGAAGGCTATCA
GGCCGATCTCTTTAATAATGGCCGCGATGGTCTCGGGGCCGCGTCGAAGGGACAGTATGATTTGATAATACTGGACGTGA
TGCTGCCTTTCCTCGACGGGTGGCAAATCATCAGCGCACTGAGGGAGTCCGGGCACGAAGAACCGGTCCTGTTTTTAACC
GCAAAGGACAACGTGCGGGACAAAGTGAAAGGACTGGAGCTTGGCGCAGATGACTACCTGATTAAGCCCTTTGATTTTAC
GGAGCTGGTTGCACGTGTAAGAACCCTACTGCGCCGGGCACGCTCGCAGGCCGCAACAGTCTGCACCATCGCCGATATGA
CCGTTGATATGGTGCGCCGGACCGTGATCCGTTCGGGGAAGAAGATCCATCTCACCGGTAAAGAATACGTTCTGCTTGAG
TTGCTGCTGCAACGCACCGGAGAAGTGTTACCCAGGAGTCTTATCTCGTCCCTGGTCTGGAACATGAATTTTGACAGTGA
TACGAATGTGATTGATGTCGCCGTGAGACGTCTGAGAAGTAAAATTGATGATGACTTTGAGCCAAAACTGATCCATACCG
TTCGCGGTGCCGGATATGTCCTGGAGATCAGAGAAGAGTGA

Protein sequence :
MQRILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAASKGQYDLIILDVMLPFLDGWQIISALRESGHEEPVLFLT
AKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRRARSQAATVCTIADMTVDMVRRTVIRSGKKIHLTGKEYVLLE
LLLQRTGEVLPRSLISSLVWNMNFDSDTNVIDVAVRRLRSKIDDDFEPKLIHTVRGAGYVLEIREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-49 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-48 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ESA_04253 YP_001440269.1 hypothetical protein BAC0308 Protein 1e-95 100
ESA_04253 YP_001440269.1 hypothetical protein BAC0638 Protein 1e-55 64
ESA_04253 YP_001440269.1 hypothetical protein BAC0197 Protein 9e-60 63
ESA_04253 YP_001440269.1 hypothetical protein BAC0083 Protein 4e-59 62
ESA_04253 YP_001440269.1 hypothetical protein BAC0111 Protein 6e-57 60
ESA_04253 YP_001440269.1 hypothetical protein BAC0125 Protein 6e-55 58
ESA_04253 YP_001440269.1 hypothetical protein BAC0347 Protein 1e-49 55
ESA_04253 YP_001440269.1 hypothetical protein NC_010079.5776364.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_002952.2859858.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_007622.3794948.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_003923.1003417.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_013450.8614146.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_002951.3238224.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_007793.3914065.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein NC_002758.1121390.p0 Protein 2e-30 44
ESA_04253 YP_001440269.1 hypothetical protein AE015929.1.gene1106. Protein 2e-25 42
ESA_04253 YP_001440269.1 hypothetical protein HE999704.1.gene1528. Protein 2e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ESA_04253 YP_001440269.1 hypothetical protein VFG0596 Protein 6e-50 55
ESA_04253 YP_001440269.1 hypothetical protein VFG1390 Protein 6e-35 44
ESA_04253 YP_001440269.1 hypothetical protein VFG1389 Protein 2e-29 42