Gene Information

Name : csrR (SUB0379)
Accession : YP_002561732.1
Strain : Streptococcus uberis 0140J
Genome accession: NC_012004
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 376621 - 377307 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGACAAAGAAAATTTTAATCGTTGAAGATGAGAAAAATCTTGCGAGATTTGTATCTTTAGAATTACAACATGAAGGTTA
TGAAGTAACAGTCGAGGTAAATGGGCGTGAAGGTTTAGAAACGGCTCTTGAAAAAGACTTTGATTTAATCCTTTTAGATT
TAATGTTACCTGAAATGGATGGTTTTGAAGTGACACGTCGCTTACAGACTGAGAAAACAACCTATATCATGATGATGACT
GCACGTGATTCTATCATGGATGTCGTGGCAGGTTTAGACCGTGGTGCGGATGATTATATTGTTAAACCATTTGCCATTGA
AGAGTTATTAGCACGTATCAGAGCGATTTTCCGTCGTCAAGACATTGAAACAGAGAAGAAAGCTCCCAATCAAGGAATCT
ATCGTGATTTAGTTTTAAATCCACAAAATCGTTCAGTCAACCGTGGTGATGATGAAATTTCATTAACAAAACGTGAATAT
GATTTGTTAAATATTCTTATGTCAAATATGAACCGTGTTATGACACGTGAAGAATTATTATCAAACGTTTGGAAATATGA
CGAAGCAGTGGAAACAAATGTTGTTGATGTCTATATTCGTTACCTTCGTGGAAAAATTGACATGCCTGGAAGAGAGTCAT
ACATTCAAACAGTTCGTGGAATGGGATACGTAATTCGCGAGAAATAG

Protein sequence : 
MTKKILIVEDEKNLARFVSLELQHEGYEVTVEVNGREGLETALEKDFDLILLDLMLPEMDGFEVTRRLQTEKTTYIMMMT
ARDSIMDVVAGLDRGADDYIVKPFAIEELLARIRAIFRRQDIETEKKAPNQGIYRDLVLNPQNRSVNRGDDEISLTKREY
DLLNILMSNMNRVMTREELLSNVWKYDEAVETNVVDVYIRYLRGKIDMPGRESYIQTVRGMGYVIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-36 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-36 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csrR YP_002561732.1 response regulator protein HE999704.1.gene1528. Protein 2e-59 61
csrR YP_002561732.1 response regulator protein NC_010079.5776364.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_002952.2859858.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_007622.3794948.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_003923.1003417.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_013450.8614146.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_002951.3238224.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_007793.3914065.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein NC_002758.1121390.p0 Protein 1e-51 54
csrR YP_002561732.1 response regulator protein AE015929.1.gene1106. Protein 3e-49 53
csrR YP_002561732.1 response regulator protein NC_012469.1.7685629. Protein 2e-38 44
csrR YP_002561732.1 response regulator protein BAC0125 Protein 3e-36 43
csrR YP_002561732.1 response regulator protein AE016830.1.gene1681. Protein 8e-40 42
csrR YP_002561732.1 response regulator protein BAC0197 Protein 1e-32 42
csrR YP_002561732.1 response regulator protein HE999704.1.gene2815. Protein 1e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csrR YP_002561732.1 response regulator protein VFG1390 Protein 3e-41 43
csrR YP_002561732.1 response regulator protein VFG0596 Protein 9e-37 43
csrR YP_002561732.1 response regulator protein VFG1702 Protein 2e-32 41
csrR YP_002561732.1 response regulator protein VFG1389 Protein 2e-35 41