Gene Information

Name : ECO55CA74_21105 (ECO55CA74_21105)
Accession : YP_006161326.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4382696 - 4383184 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTGGCCCTGACACTGGAAGCCGACAGCGTTAACGTACAGGCACTGAATATGGGGCGAATTGTCGTTGACATTGA
TGGTGTTAATCTCGCTGAACTGATTAACATGGTCTGCGATAACGGCTACTCCCTTCGTGTTGTTGATGAATCTGACCGGA
CCTCAGCAGACTGCACGCCACCATTTACTGCCCTTACCGGCATACGCTGCAGTACCGCACATATCACGGAAACGGACAAC
GCCTGGCTGTACTCGCTGTCACACCAGACCAGTGACTTCGGTGAATCAGAATGGATTCATTTTACCGGTAACGGCTATCT
GTTGCGTACCGATGCGTGGTCGTACCCGGTTCTGCGGCTTAAACGCCTGGGTCTGTCAAAAACGTTCCGTCGTCTGGTCG
TCACACTCATCCGGCGTTATGGTGTCAGTCTCATTCATCTGGATGCCAGTGCCGGATGTCTGCCAGGTTTACCCACTTTT
AATTGGTAA

Protein sequence :
MKLALTLEADSVNVQALNMGRIVVDIDGVNLAELINMVCDNGYSLRVVDESDRTSADCTPPFTALTGIRCSTAHITETDN
AWLYSLSHQTSDFGESEWIHFTGNGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAGCLPGLPTF
NW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31487.1 L0008 Not tested LEE Protein 1e-71 100
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 2e-71 100
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 1e-71 100
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 2e-71 100
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 5e-70 95
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 5e-70 95
unnamed AAL08479.1 unknown Not tested SRL Protein 6e-69 93
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 1e-66 92
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 2e-64 90
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 1e-65 89
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-64 89
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 7e-66 89
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-58 88
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 4e-65 88
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 2e-63 87
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 2e-63 86
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-60 86
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-60 86
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 8e-61 85
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 2e-61 84
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 2e-61 84
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 9e-54 83
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 3e-61 82
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 2e-54 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21105 YP_006161326.1 hypothetical protein VFG0787 Protein 6e-72 100
ECO55CA74_21105 YP_006161326.1 hypothetical protein VFG1070 Protein 2e-69 93
ECO55CA74_21105 YP_006161326.1 hypothetical protein VFG1621 Protein 6e-67 92
ECO55CA74_21105 YP_006161326.1 hypothetical protein VFG1683 Protein 3e-66 89
ECO55CA74_21105 YP_006161326.1 hypothetical protein VFG1531 Protein 2e-65 88
ECO55CA74_21105 YP_006161326.1 hypothetical protein VFG0664 Protein 5e-62 84