Gene Information

Name : ECO55CA74_21155 (ECO55CA74_21155)
Accession : YP_006161336.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4386572 - 4386979 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGGTCGATACGTTTAATGATGAAGTGTTTAATTACTATCTTGAACAAAAAGGGTACACAATACAGAAGGAGTTTCTTTG
TGGCAGTGCCTTTTTTATCGGATGGCGGATTGAGACACCTTTTTTTTCATTAGCGTACAGACTGGATGAACAAGAACTGA
TTTTGTGCTCTTTTGAAGCACGTAACCAAACAGGGCTTAACGGCCCTGTTTTATCGCTGACTCATTTGCTCGAAGAGTTG
TATCACCATTTTTCGGGTATTAAGAAAATCAGCGCGATGAAATCTAAGATTGGTTCAGATTCAGAACGTCAAAAGCGCGA
AGAGTTGTTTAATTACTTCATCAGAAAGGGTGCCGTGCAGCAAGAAACAGAAGACGGAATTTGGTTCGTAATGAACGTAA
ATAGTTAA

Protein sequence :
MVDTFNDEVFNYYLEQKGYTIQKEFLCGSAFFIGWRIETPFFSLAYRLDEQELILCSFEARNQTGLNGPVLSLTHLLEEL
YHHFSGIKKISAMKSKIGSDSERQKREELFNYFIRKGAVQQETEDGIWFVMNVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31498.1 L0019 Not tested LEE Protein 2e-59 100
unnamed ACU09443.1 conserved hypothetical protein Not tested LEE Protein 2e-59 100
Z5104 NP_290253.1 hypothetical protein Not tested LEE Protein 3e-59 100
ECs4553 NP_312580.1 hypothetical protein Not tested LEE Protein 3e-59 100
unnamed AAC38397.1 Orf27 Not tested LEE Protein 7e-59 99
unnamed AAK26730.1 unknown Not tested LEE Protein 4e-57 98
cesD2 YP_003223460.1 chaperone CesD2 Not tested LEE Protein 6e-57 98
unnamed AAL57557.1 unknown Not tested LEE Protein 4e-57 98
cesD2 YP_003232168.1 T3SS chaperone CesD2 Virulence LEE Protein 6e-57 98
unnamed AAL60253.1 unknown Not tested LEE Protein 4e-57 98
cesD2 YP_003236073.1 chaperone CesD2 Not tested LEE Protein 2e-57 98
st39 CAC81877.1 ST39 protein Not tested LEE II Protein 4e-57 98
unnamed CAI43859.1 hypothetical protein Not tested LEE Protein 4e-57 98
unnamed AAL06384.1 unknown Not tested LEE Protein 1e-52 90
cesD2 AFO66329.1 putative chaperone Not tested SESS LEE Protein 1e-39 67
cesD2 AFO66386.1 putative chaperone Not tested SESS LEE Protein 1e-39 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21155 YP_006161336.1 hypothetical protein VFG0797 Protein 8e-60 100
ECO55CA74_21155 YP_006161336.1 hypothetical protein VFG0745 Protein 3e-59 99