Gene Information

Name : ECO55CA74_21170 (ECO55CA74_21170)
Accession : YP_006161339.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : espA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4389082 - 4389660 bp
Length : 579 bp
Strand : -
Note : -

DNA sequence : 
ATGGATACATCAAATGCAACATCCGTTGTTAATGTGAGTGCGAGTTCTTCGACATCGACGATCTATGACTTAGGTAATAT
GTCGAAGGATGAGGTGGTTAAGCTATTTGAGGAACTCGGTGTTTTTCAGGCTGCGATTCTCATGTTTTCTTATATGTATC
AGGCACAAAGTAATCTGTCGATTGCAAAGTTTGCTGATATGAATGAGGCATCTAAAGCGTCAACCACGGCACAAAAGATG
GCTAATCTTGTGGATGCCAAAATTGCTGATGTTCAGAGTAGCACTGATAAGAATGCGAAAGCCAAACTTCCTCAAGACGT
GATTGACTATATAAACGATCCACGTAATGACATAAGTGTAACTGGTATTAGTGATCTTAGTGGTGATTTAAGCGCTGGTG
ATCTGCAAACAGTGAAGGCGGCTATTTCAGCTAAAGCGAATAACCTGACAACGGTAGTGAATAATAGCCAGCTCGAAATT
CAGCAAATGTCGAATACATTAAATCTCTTAACGAGTGCACGTTCTGATGTGCAATCTCTACAATATAGAACTATTTCAGC
AATATCCCTTGGTAAATAA

Protein sequence : 
MDTSNATSVVNVSASSSTSTIYDLGNMSKDEVVKLFEELGVFQAAILMFSYMYQAQSNLSIAKFADMNEASKASTTAQKM
ANLVDAKIADVQSSTDKNAKAKLPQDVIDYINDPRNDISVTGISDLSGDLSAGDLQTVKAAISAKANNLTTVVNNSQLEI
QQMSNTLNLLTSARSDVQSLQYRTISAISLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espA NP_290256.1 hypothetical protein Virulence LEE Protein 2e-73 99
ECs4556 NP_312583.1 protein EspA Virulence LEE Protein 2e-73 99
espA AAC31501.1 L0022 Virulence LEE Protein 1e-73 99
espA ACU09446.1 secreted protein EspA Virulence LEE Protein 1e-73 99
espA YP_003232165.1 translocator EspA Virulence LEE Protein 3e-69 86
espA AAK26727.1 EspA Virulence LEE Protein 2e-69 86
espA AAL57554.1 EspA Virulence LEE Protein 2e-69 86
espA CAC81874.1 EspA protein Virulence LEE II Protein 2e-69 86
espA YP_003236076.1 translocon EspA Virulence LEE Protein 5e-66 85
espA AAC38394.1 EspA Virulence LEE Protein 9e-67 85
espA CAI43862.1 EspA protein Virulence LEE Protein 1e-67 82
espA YP_003223463.1 translocon EspA Virulence LEE Protein 2e-67 82
espA AAO66617.1 EspA beta variant Virulence LEE Protein 6e-66 82
unnamed AAL06381.1 EspA Virulence LEE Protein 7e-65 81
espA AFO66319.1 putative secreted protein EspA Not tested SESS LEE Protein 3e-62 79
espA AFO66389.1 putative secreted protein EspA Virulence SESS LEE Protein 3e-62 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21170 YP_006161339.1 espA VFG0800 Protein 5e-74 99
ECO55CA74_21170 YP_006161339.1 espA VFG0742 Protein 4e-67 85