Gene Information

Name : GPOL_c44420 (GPOL_c44420)
Accession : YP_005284811.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Virulence
Product : putative two-component system regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5039188 - 5039868 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGCGGGTTCTGGTAGTCGACGACGATCGTCACGTGGCGGAGACGGTGCGCCGGATGATGCTGGCCGAAGGCTGGGTGGT
CGATGTGGTCCACGACGGTGCGGCCGGTCTCGAGGCCGCATCCACGGACCGCTACGACGTGATCATCCTCGACATCATGA
TGCCGCGACTGAACGGCTATGAAGTGGTTCGGGAACTGCGGAAGGCGCGGGTGTGGACGCCGATTCTGATGCTCACCGCC
AAGGACGGTGAGTACGATCAAGCCGAGGCGTTCGACTTCGGTGCCGATGACTACCTCACGAAGCCTTTTTCTTTCGTGGT
TCTCATCGCCCGGATGCGCGCATTGGCACGGCGGGGCGTGCCGGAGCGCCCGACCGTGCTGGAGGCGGGGAGTCTCACGC
TCGACCCGGCGGCGCATACCGTTGCCCGTGGTGTCACCACCCTGAAATTGACTCCCAAGGAGTTCGCGCTACTGGAGTTC
CTGATGCGTCACAAGGGCGAGGTCGTGACCAAGGCCGAGATCCTGACCTCGGTGTGGGATGCCAACTACCACGGCGACGA
CAACGTCGTCGAGGTGTACGTGAGCTATCTGCGGCGGCGCATCGACACGCCATTCGGATGCCGGTCCATCGAGACCGTCC
GGGGTGTTGGTTACCGGTTTGCCGCCGACGGCGGAGGTTAG

Protein sequence :
MRVLVVDDDRHVAETVRRMMLAEGWVVDVVHDGAAGLEAASTDRYDVIILDIMMPRLNGYEVVRELRKARVWTPILMLTA
KDGEYDQAEAFDFGADDYLTKPFSFVVLIARMRALARRGVPERPTVLEAGSLTLDPAAHTVARGVTTLKLTPKEFALLEF
LMRHKGEVVTKAEILTSVWDANYHGDDNVVEVYVSYLRRRIDTPFGCRSIETVRGVGYRFAADGGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-37 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c44420 YP_005284811.1 putative two-component system regulator U82965.2.orf14.gene. Protein 2e-30 44
GPOL_c44420 YP_005284811.1 putative two-component system regulator BAC0197 Protein 1e-40 44
GPOL_c44420 YP_005284811.1 putative two-component system regulator BAC0083 Protein 1e-40 43
GPOL_c44420 YP_005284811.1 putative two-component system regulator BAC0111 Protein 9e-42 43
GPOL_c44420 YP_005284811.1 putative two-component system regulator Y16952.3.orf35.gene. Protein 6e-26 42
GPOL_c44420 YP_005284811.1 putative two-component system regulator BAC0125 Protein 1e-41 42
GPOL_c44420 YP_005284811.1 putative two-component system regulator BAC0308 Protein 2e-39 42
GPOL_c44420 YP_005284811.1 putative two-component system regulator AE015929.1.gene1106. Protein 2e-32 41
GPOL_c44420 YP_005284811.1 putative two-component system regulator BAC0638 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c44420 YP_005284811.1 putative two-component system regulator VFG1390 Protein 1e-44 48
GPOL_c44420 YP_005284811.1 putative two-component system regulator VFG0596 Protein 4e-38 41
GPOL_c44420 YP_005284811.1 putative two-component system regulator VFG1386 Protein 2e-34 41