Gene Information

Name : PA4381 (PA4381)
Accession : NP_253071.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4912141 - 4912824 bp
Length : 684 bp
Strand : -
Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)

DNA sequence : 
ATGCGAATACTGGTGGTCGAAGACAACCGCGACATCCTGGCCAACCTGGCCGATTACCTGTCGCTCAAGGGCTATACCGT
GGATTGCGCGCAGGACGGGCTGTCCGGCCTGCACCTGGCGGCCACCGAGCACTACGACCTGATCGTGCTCGACGTGATGC
TGCCGGGAATCGACGGCTATGCCCTGTGCCGGCGCCTGCGCGAAGACGCACGGCGCGACACCCCGGTGATCATGCTCACC
GCCCGCGACCAGTTGGACGATCGCCTGCAGGGGTTTCGTTCCGGAGCCGACGATTACCTGGTCAAGCCCTTCGCCCTTTC
CGAACTTTCCGCACGCATCGAGGCGGTGCTGCGTCGCGCCCAGGGTGGCGGCCGCCGCGAGCTGAGCGTGGCCGATCTCA
GCTATGACCTGGATACCCTGGAGGTCAAGCGCGCGGGCAAGTCGCTCAAGCTCAATCCGATCGGCCTAAAGCTGCTCGCC
GTGCTGATGCAGAAGAGCCCCCATGTGGTGCGCCGGGATGCCCTGGAAGAAGCGGTCTGGGGCGACGACTGCCCGGACAG
TGACAGCCTGCGCAGCCACGTCCATCAACTCCGTCAGGTGATCGACAAGCCATTCTCCGTGGCCTTGCTGCATACGGTGC
ATGGCGTCGGCTACCGCCTGGCGGAGGAGCCGAATGGAGTATAA

Protein sequence : 
MRILVVEDNRDILANLADYLSLKGYTVDCAQDGLSGLHLAATEHYDLIVLDVMLPGIDGYALCRRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLVKPFALSELSARIEAVLRRAQGGGRRELSVADLSYDLDTLEVKRAGKSLKLNPIGLKLLA
VLMQKSPHVVRRDALEEAVWGDDCPDSDSLRSHVHQLRQVIDKPFSVALLHTVHGVGYRLAEEPNGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-37 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA4381 NP_253071.1 two-component response regulator BAC0125 Protein 8e-37 42
PA4381 NP_253071.1 two-component response regulator BAC0197 Protein 6e-37 42
PA4381 NP_253071.1 two-component response regulator BAC0487 Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA4381 NP_253071.1 two-component response regulator VFG0596 Protein 3e-37 42
PA4381 NP_253071.1 two-component response regulator VFG1390 Protein 1e-35 42