Gene Information

Name : gbsA (BMWSH_4379)
Accession : YP_005496567.1
Strain : Bacillus megaterium WSH-002
Genome accession: NC_017138
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4131895 - 4133382 bp
Length : 1488 bp
Strand : -
Note : -

DNA sequence :
ATGGATCGTACAGCCGTTAAAACTTTAGCTTTGAATATGTACATAAATGGAGAGTGGAGAAAAGCAGAGAAGCAGCGTCC
AACTGTTAACCCAGCGACAGGTGAAGTAATTGGATATGCTGCAGAAGGCAGCGCAGAAGATATGAAAGCAGCAATTGAAG
CAGCACGAGAAGCCTTTGACAGCGGAATTTGGTCTGAGACTTCTGCATCTGAAAGAGCAGCCATCTTATTCAAAATTGCC
GATAAGCTTGAGGAAGCGAAAGAGGAATTAGCAGCGCTAGAAACAATGGATAACGGAAAGCCATATCGTGAAGCTGAGGC
TGATGTGGAAGATGCAGCTGCTTGTTTTAGGTATTACGCTGGGTTAATTACAAAACCAGACGGTCAAACGTACAGTGTTC
CTGCACCTATGCAAGCAATGGTTATAAAAGAACCAATCGGGGTGTGCGGACTGATTGTACCTTGGAATTATCCGCTCTTG
ATGAGCGTGTGGAAAATTGCACCTGCTTTAGCTGCAGGAAATACGATTGTATTTAAACCTTCTGAAGTGACACCAGTTAC
TCCTACAAAACTTTTTGAGATTTTAGAAAGCGTAGGATTGCCAAAAGGAGTAGCAAATCTTGTTATGGGAGCCGGAGATA
CTGTGGGAAATACGCTTATTCAAGATAAGCGTGTTGATAAGATTTCTTTTACAGGCGGAACGGTAACTGGAAAACACATT
ATGCGTCAAGCAGCAGAAAATGTAACGAAAGTCTCTTTAGAACTTGGAGGAAAGTCACCGAACATTATATTTGCTGACGC
TGATTTTGAAACAGCTGTAGATTATGCCTTGTTTGGAATTTTTGCAGGGAGCGGCCAAATTTGCGCTGCAGGTTCTCGTA
TTTTAGTAGAAGAAAGCATTGCTGAGCGATTTATCGAACGTTTTGCAGAGCGTGCTCAAAAAATTAAAGTAGGAAATGGA
ATGGATCAAGAGATTGAAATGGGCCCTCTTGTAAGTGAAGAACATATGAAAAAAGTATTAAAGTACATCGAAATTGGAAA
GCAAGAAGGCGCTCGCCTTGTATGCGGAGGCAATCGAATCACCAGCAGTGGGTTGGAAAAAGGTTTTTTTGTAGAACCTA
CGGTTTTTAGTAACGTTACGTCAAATATGAAAATTGTGCAAGATGAAATCTTTGGGCCTGTTGTCGTTATTCAAACGTTT
AAAGATGAAAAAGAAGCTATTAAGCTTGCAAATGATACGGAATACGGTTTAGCAGGCAGCGTGTTTACAACCGACGGTGC
AAAAGCTCTTCGGGTGATTAAAAAGCTTCGTGCGGGTATCACTTGGGTAAACACGTATCATTTTACATTTAACGAAGCGC
CTTGGGGCGGATATAAGCAGAGCGGAATTGGTCGAGGACTAGGAACGTTTGGTTTGGAAGAATTTCAAGAAGTAAAACAA
ATTAATATTAATTTACAAGTAGAGCCAATCGGCTGGTTTAAAAATTAA

Protein sequence :
MDRTAVKTLALNMYINGEWRKAEKQRPTVNPATGEVIGYAAEGSAEDMKAAIEAAREAFDSGIWSETSASERAAILFKIA
DKLEEAKEELAALETMDNGKPYREAEADVEDAAACFRYYAGLITKPDGQTYSVPAPMQAMVIKEPIGVCGLIVPWNYPLL
MSVWKIAPALAAGNTIVFKPSEVTPVTPTKLFEILESVGLPKGVANLVMGAGDTVGNTLIQDKRVDKISFTGGTVTGKHI
MRQAAENVTKVSLELGGKSPNIIFADADFETAVDYALFGIFAGSGQICAAGSRILVEESIAERFIERFAERAQKIKVGNG
MDQEIEMGPLVSEEHMKKVLKYIEIGKQEGARLVCGGNRITSSGLEKGFFVEPTVFSNVTSNMKIVQDEIFGPVVVIQTF
KDEKEAIKLANDTEYGLAGSVFTTDGAKALRVIKKLRAGITWVNTYHFTFNEAPWGGYKQSGIGRGLGTFGLEEFQEVKQ
ININLQVEPIGWFKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-80 45
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-83 45
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-83 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-83 45
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-82 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-81 43
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gbsA YP_005496567.1 aldehyde dehydrogenase VFG0082 Protein 6e-81 45