Gene Information

Name : ECs4550 (ECs4550)
Accession : NP_312577.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : protein EspF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4589257 - 4590003 bp
Length : 747 bp
Strand : -
Note : similar to L0016 [Escherichia coli EDL933] gi|3414884|gb|AAC31495.1|, EspF [Escherichia coli E2348/69] gi|2865308|gb|AAC38400.1|

DNA sequence : 
ATGCTTAATGGAATTAGTAACGCTGCTTCTACACTAGGGCGGCAGCTTGTAGGTATCGCAAGTCGAGTGAGCTCTGCGGG
GGGAACTGGATTTTCTGTAGCCCCTCAGGCCGTGCGTCTTACTCCGGTGAAAGTTCATTCCCCTTTTTCTCCAGGCTCGT
CGAATGTTAATGCGAGAACGATTTTTAATGTGAGCAGCCAGGTGACTTCATTTACTCCCTCTCGTCCGGCACCGCCGCCA
CCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTA
TGAAAAATCGAAAGGTCCTGAGGCTTTAGGTTTTAAGCCCGCCCGTCAGGCACCGCCGCCACCGACAAGTGGACAGGCAT
CCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTATGAAAAATCGAAAGGTCCT
GAGGCTTTAGGTTTTAAGCCCGCCCGTCAGGCACCGCCGCCACCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTT
ACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTATGAAAAATCGAAAGGTCCTGAGGCTTTAGGTTTTAAGC
CCGCCCGTCAGGCACCACCGCCACCGACAGGGCCTAGTGGACTACCGCCCCTTGCACAGGCATTAAAAGATCATTTAGCT
GCCTATGAGCAATCGAAGAAAGGGTAA

Protein sequence : 
MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVKVHSPFSPGSSNVNARTIFNVSSQVTSFTPSRPAPPP
PTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGP
EALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTGPSGLPPLAQALKDHLA
AYEQSKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31495.1 L0016 Not tested LEE Protein 1e-89 100
unnamed ACU09440.1 LEE associated secreted protein EspF Virulence LEE Protein 1e-89 100
espF NP_290250.1 hypothetical protein Virulence LEE Protein 2e-89 100
ECs4550 NP_312577.1 protein EspF Virulence LEE Protein 2e-89 100
espF AAC38400.1 EspF Virulence LEE Protein 7e-62 88
espF YP_003232171.1 T3SS effector EspF Virulence LEE Protein 2e-49 78
espF AAL60256.1 EspF Virulence LEE Protein 1e-49 78
espF CAC81880.1 EspF protein Virulence LEE II Protein 1e-49 78
espF YP_003223457.1 T3SS effector EspF Virulence LEE Protein 7e-56 76
espF CAI43856.1 EspF protein Virulence LEE Protein 5e-56 76
espF YP_003236070.1 T3SS secreted effector EspF Virulence LEE Protein 4e-62 65
unnamed AAL06387.1 EspF Virulence LEE Protein 7e-58 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4550 NP_312577.1 protein EspF VFG0794 Protein 7e-90 100
ECs4550 NP_312577.1 protein EspF VFG0748 Protein 4e-62 88