Gene Information

Name : PP4_44810 (PP4_44810)
Accession : YP_008115518.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5088622 - 5089296 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
ATGCGTGTGCTGATCATCGAAGACGAAGAAAAAACCGCCGACTACCTGCATCGCGGCCTGAGCGAACAGGGCTTTACCGT
GGACCTGGCACGGGACGGCATCGATGGCCTGCACCTGGCCCTGGAGGGCGACTACGCGGTAATCGTGCTGGATGTGATGC
TGCCTGGCCTGGACGGCTATGGTGTGCTGCGCGCCTTGCGCGCGCGCAAGCAGACGCCGGTGATCATGCTGACCGCCCGT
GAGCGGGTCGAAGACCGCATTCATGGCCTGCGTGAAGGCGCCGACGACTACCTGGGCAAGCCGTTCTCGTTCCTCGAACT
GGTCGCCCGCCTGCAAGCCCTGACCCGCCGCAGCAGCAGCCATGAACCGTTGCAGGTGCAAGTGGCAGACTTGTGGATCG
ACCTGATGGCACGCAAGGCCACACGCGCCGGCCAGCGTCTGGACCTGACTGCCAAGGAGTTCTCGCTGCTCAGCGTGCTG
GCCCGGCGGCAGGGTGAAATCCTGTCGAAGACGGCGATTGCAGAGCTGGTCTGGGACATCAACTTCGACAGCGACGCCAA
CGTCGTGGAAGTGGCGATCAAACGCCTGCGCGCCAAGCTCGACGGGCCCTTCGACAACAAGCTGCTGCACACCATCCGAG
GCATGGGCTATGTCCTGGAAAACCGTGCGGGGTAA

Protein sequence :
MRVLIIEDEEKTADYLHRGLSEQGFTVDLARDGIDGLHLALEGDYAVIVLDVMLPGLDGYGVLRALRARKQTPVIMLTAR
ERVEDRIHGLREGADDYLGKPFSFLELVARLQALTRRSSSHEPLQVQVADLWIDLMARKATRAGQRLDLTAKEFSLLSVL
ARRQGEILSKTAIAELVWDINFDSDANVVEVAIKRLRAKLDGPFDNKLLHTIRGMGYVLENRAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-55 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-54 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_44810 YP_008115518.1 two-component response regulator BAC0125 Protein 1e-62 57
PP4_44810 YP_008115518.1 two-component response regulator BAC0083 Protein 2e-57 57
PP4_44810 YP_008115518.1 two-component response regulator BAC0197 Protein 9e-59 56
PP4_44810 YP_008115518.1 two-component response regulator BAC0111 Protein 2e-58 54
PP4_44810 YP_008115518.1 two-component response regulator BAC0638 Protein 1e-50 54
PP4_44810 YP_008115518.1 two-component response regulator BAC0308 Protein 9e-55 51
PP4_44810 YP_008115518.1 two-component response regulator BAC0347 Protein 1e-51 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_44810 YP_008115518.1 two-component response regulator VFG0596 Protein 7e-56 54
PP4_44810 YP_008115518.1 two-component response regulator VFG1389 Protein 1e-37 47
PP4_44810 YP_008115518.1 two-component response regulator VFG1386 Protein 7e-35 44