Gene Information

Name : ECs4585 (ECs4585)
Accession : NP_312612.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4618630 - 4619229 bp
Length : 600 bp
Strand : -
Note : similar to L0051 [Escherichia coli O157:H7 strain EDL933] gi|3414919|gb|AAC31530.1|, Orf4 [Escherichia coli strain E2348/69] gi|2865274|gb|AAC38367.1|

DNA sequence :
ATGACAATTTTTAATAAAATAGACTATAACTATTATAAATTAATTAATTATCCAATCATGATGGTTCATGATGAATGGCT
AGGTGATTTAACCGGTGTCAATCAGGTCAGTTTTCGGCGTTTAAGAGAAACTAGTTCTACTCGTAATCAACTCAATAAGA
TATTGCGTCAGGAAATACATGATAAAATTTCTGGTGTGGAATTATCTGACATAAATAAGGAAGGTTTTTTATATCAGTCA
ATTGGGAAAATAAGATTGCTTGCTCTAAGTAGTGCATTATTTGACATTCAATGCCCTGATTATATTTTCTCACGATTATA
TCGAGAAACTCTGATTAGAGAGATAGGATATCAAAATGTGAAGCAGTTATCATTCTATTGGCAGGGAGGGCAATGTAAAC
CAGAATATGGTGAAGAACGGTTTTGTGCTGAGTTAATAAAATACGGTGCAGGAAATTTGGAGTGGCTATTTGCTGATAAT
CCTTTATGGACCATAGTCAAATATCTTTTGCCGAAAAGTGGAGAAATAAAACCAACTCATATTAATGATTTATTTCTTAA
CAGACTTAATAAAATTTTATTGCCTTATGAAACTTTATGA

Protein sequence :
MTIFNKIDYNYYKLINYPIMMVHDEWLGDLTGVNQVSFRRLRETSSTRNQLNKILRQEIHDKISGVELSDINKEGFLYQS
IGKIRLLALSSALFDIQCPDYIFSRLYRETLIREIGYQNVKQLSFYWQGGQCKPEYGEERFCAELIKYGAGNLEWLFADN
PLWTIVKYLLPKSGEIKPTHINDLFLNRLNKILLPYETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31530.1 L0051 Not tested LEE Protein 1e-90 100
unnamed ACU09475.1 conserved hypothetical protein Not tested LEE Protein 1e-90 100
Z5137 NP_290285.1 hypothetical protein Not tested LEE Protein 2e-90 100
ECs4585 NP_312612.1 hypothetical protein Not tested LEE Protein 2e-90 100
unnamed AAC38367.1 Orf4 Not tested LEE Protein 3e-90 99
ECO111_3769 YP_003236105.1 T3SS component Virulence LEE Protein 4e-90 99
unnamed AAK26698.1 unknown Not tested LEE Protein 6e-89 97
ECO103_3635 YP_003223492.1 T3SS component Virulence LEE Protein 9e-89 97
unnamed AAL57525.1 unknown Not tested LEE Protein 6e-89 97
ECO26_5254 YP_003232136.1 T3SS component Virulence LEE Protein 9e-89 97
unnamed AAL57586.1 unknown Not tested LEE Protein 6e-89 97
st07 CAC81845.1 ST07 protein Not tested LEE II Protein 6e-89 97
unnamed CAI43891.1 hypothetical protein Not tested LEE Protein 6e-89 97
unnamed AAL06352.1 unknown Not tested LEE Protein 9e-84 86
SESS1635_03846 AFO66398.1 hypothetical protein; possible LEE-encoded type III secretion system factor Not tested SESS LEE Protein 1e-54 52
SESS1296_03631 AFO66318.1 hypothetical protein; possible LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-54 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4585 NP_312612.1 hypothetical protein VFG0829 Protein 5e-91 100
ECs4585 NP_312612.1 hypothetical protein VFG0713 Protein 1e-90 99