Gene Information

Name : Pfl01_4663 (Pfl01_4663)
Accession : YP_350391.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5262736 - 5263413 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence :
ATGCGCGTTCTGATTATCGAAGACGAAGAGAAAACCGCGGACTACCTGCACCGCGGCCTGACGGAACAGGGTTACACCGT
GGATCGGGCCCGCGACGGCGTCGAGGGCCTGCACCTGGCGCTGGAAAGCGACTACGCGGTGATCGTCCTCGACGTGATGC
TGCCGGGCCTCGACGGCTTCGGCGTACTGCGCGCATTGCGTGCGCGCAAGCAGACGCCGGTGATCATGCTCACCGCCCGC
GAACGGGTCGAAGACCGGATCCGAGGCCTGCGCGATGGCGCCGACGATTACCTCGGCAAACCGTTCTCCTTCCTCGAACT
CGTGGCGCGCCTGCAAGCGCTGACCCGGCGCAGTGGCGGCCACGAACCGGTACAAGTGAGCATCGCCGACCTGTGGATCG
ATCTGATCAGCCGCAAGGCCACCCGCGCCGGCACCCGCCTGGATCTGACCGCGAAGGAGTTTTCACTGCTCAGCGTGCTG
GCCCGGCGTCAGGGCGAAATCCTCTCGAAAACCGCGATTGCCGAGATGGTCTGGGACATCAATTTCGACAGCGACGCCAA
TGTGGTCGAAGTCGCGATCAAGCGCCTGCGAGCCAAGCTCGACGGGCCGTTCGACGAGAAACTGCTGCACACCATCCGTG
GCATGGGTTATGTGCTGGAGAGCCGTGGTGTCCAGTAA

Protein sequence :
MRVLIIEDEEKTADYLHRGLTEQGYTVDRARDGVEGLHLALESDYAVIVLDVMLPGLDGFGVLRALRARKQTPVIMLTAR
ERVEDRIRGLRDGADDYLGKPFSFLELVARLQALTRRSGGHEPVQVSIADLWIDLISRKATRAGTRLDLTAKEFSLLSVL
ARRQGEILSKTAIAEMVWDINFDSDANVVEVAIKRLRAKLDGPFDEKLLHTIRGMGYVLESRGVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-56 56
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-55 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0125 Protein 7e-63 57
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0197 Protein 1e-59 57
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-58 56
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0638 Protein 7e-52 55
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0111 Protein 1e-57 52
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0347 Protein 8e-53 50
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator BAC0308 Protein 2e-54 49
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator AE015929.1.gene1106. Protein 1e-31 41
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator VFG0596 Protein 3e-56 56
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator VFG1389 Protein 4e-38 46
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator VFG1386 Protein 2e-35 44
Pfl01_4663 YP_350391.1 two component heavy metal response transcriptional regulator VFG1390 Protein 6e-39 41