Gene Information

Name : Tery_4937 (Tery_4937)
Accession : YP_724325.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 7519815 - 7520588 bp
Length : 774 bp
Strand : -
Note : PFAM: response regulator receiveR transcriptional regulatory protein-like; KEGG: ava:Ava_1498 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCCCCGAATACTCGTCATTGATGATGATCCTGCGATCGCAGAACTCGTTGCCGTAAACTTAGAAATGGCTGGCTATGA
AGTTAGTCAAGCAGAAGATGGTATAAAAGGACAAGCTCTAGCTTTGCAACTATTACCAGACCTGATAGTGTTAGATTTAA
TGCTGCCGAAAGTAGATGGGTTTACAGTATGTCAACGTCTGCGTCGTGATGAACGAACAGCGGATATTCCAGTGTTGATG
TTAACTGCTTTGGGTCAAACCCAAGATAAAGTAGAAGGTTTTAATGCTGGTGCAGATGATTATTTAACAAAACCCTTTGA
AATAGAAGAAATGCTGGCACGAGTCCGTGCTTTACTGCGACGCACAGATCGAATTCCTCAAGCAGCTAAACATAGTGAAA
TACTAAGTTATGGCCCTTTGACCCTGGTTCCCGAAAGGTTTGAGGCTATCTGGTTTGATCAAACAGTTAAATTAACTCAT
CTGGAATTTGAGTTACTCCATTGTTTACTACAACGCCATGGCCAGACAGTATCTCCTAGTGAAATTCTTAAGGAAGTCTG
GGGTTACGATCCAGACGATGATATTGAGACAATTCGAGTCCATATTAGACATCTCAGAACTAAAATGGAACCAGATCCTC
GTCATCCTCGGTATATTAAAACCGTATATGGTGCTGGCTATTGCTTAGAATTACCTAGTAATGGGTCCAGTACTAATAAT
GAGGAAACAGCTAATTGGTCTCAACCAAATAGGGATATGGTTAGAGAACCTTAG

Protein sequence : 
MPRILVIDDDPAIAELVAVNLEMAGYEVSQAEDGIKGQALALQLLPDLIVLDLMLPKVDGFTVCQRLRRDERTADIPVLM
LTALGQTQDKVEGFNAGADDYLTKPFEIEEMLARVRALLRRTDRIPQAAKHSEILSYGPLTLVPERFEAIWFDQTVKLTH
LEFELLHCLLQRHGQTVSPSEILKEVWGYDPDDDIETIRVHIRHLRTKMEPDPRHPRYIKTVYGAGYCLELPSNGSSTNN
EETANWSQPNRDMVREP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_4937 YP_724325.1 two component transcriptional regulator HE999704.1.gene2815. Protein 8e-34 44
Tery_4937 YP_724325.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-34 42
Tery_4937 YP_724325.1 two component transcriptional regulator BAC0125 Protein 4e-26 41
Tery_4937 YP_724325.1 two component transcriptional regulator NC_012469.1.7685629. Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_4937 YP_724325.1 two component transcriptional regulator VFG1390 Protein 2e-32 43
Tery_4937 YP_724325.1 two component transcriptional regulator VFG0596 Protein 2e-20 41