Name : ylcA (SFV_0504) Accession : YP_688070.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Virulence Product : DNA-binding transcriptional activator CusR Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 530213 - 530896 bp Length : 684 bp Strand : - Note : response regulator in two-component regulatory system with CusS; regulates the copper efflux system DNA sequence : ATGAAACTGTTGATTGTCGAAGATGAAAAGAAAACCGGAGAATACTTGACCAAAGGGTTAACCGAAGCCGGTTTTGTGGT CGATTTGGCCGACAACGGGCTGAATGGCTACCATCTGGCGATGACCGGTGATTATGACCTGATAATCCTCGATATTATGC TGCCAGACGTGAACGGCTGGGATATCGTGCGCATGTTGCGCTCCGCCAATAAAGGGATGCCGATTCTGTTGCTTACCGCG CTTGGCACCATTGAACATCGCGTCAAGGGGCTGGAGTTGGGGGCAGATGACTACCTGGTGAAACCGTTCGCTTTTGCTGA ACTGCTGGCGCGGGTGCGCACTCTCCTGCAGCGCGGGGCGGCGGTGATTATCGAAAGTCAGTTTCAGGTTGCCGATCTGA TGGTCGATCTCGTCAGCCGCAAAGTCACCCGCAGCGGCACGCGCATCACTCTGACCAGTAAAGAATTTACTCTGCTGGAG TTTTTTCTCCGCCATCAGGGCGAAGTGCTGCCCCGCTCGCTTATCGCCTCGCAGGTATGGGACATGAATTTCGACAGCGA CACTAACGCCATTGATGTGGCGGTGAAGCGGCTACGCGGCAAAATCGACAACGACTTTGAGCCGAAGCTGATTCAAACCG TGCGCGGCGTGGGTTACATGCTTGAGGTGCCGGATGGTCAGTAA Protein sequence : MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTA LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLQRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLE FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYMLEVPDGQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 8e-56 | 52 |
copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 1e-55 | 52 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0111 | Protein | 1e-103 | 99 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0347 | Protein | 6e-87 | 82 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0083 | Protein | 3e-70 | 61 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0638 | Protein | 6e-63 | 61 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0308 | Protein | 2e-63 | 60 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0197 | Protein | 2e-63 | 59 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | BAC0125 | Protein | 2e-63 | 56 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | AE000516.2.gene3505. | Protein | 2e-27 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | VFG0596 | Protein | 3e-56 | 52 |
ylcA | YP_688070.1 | DNA-binding transcriptional activator CusR | VFG1390 | Protein | 6e-43 | 43 |