Gene Information

Name : M062_25775 (M062_25775)
Accession : YP_008135535.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5551217 - 5551906 bp
Length : 690 bp
Strand : +
Note : response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCGCATCCTGGTGATCGAAGACGATACGAAGACCGGCGAGTACCTGAAGAAGGGCCTCGGCGAGTCGGGCTATGCGGT
CGACTGGTCGCAGCACGGCGCCGACGGTCTCTACCTGGCGCTGGAGAACCGCTACGACCTGGTGGTCCTCGACGTGATGC
TGCCCGGCCTGGACGGTTGGCAGATCATGGAAGTGCTGCGCAAGAAGCACGATGTGCCGGTGCTCTTCCTCACCGCCCGC
GACCAGCTGCAAGACCGTATCCGCGGCCTCGAACTGGGTGCTGACGACTACCTGGTGAAACCCTTCTCCTTCACCGAGTT
GCTGCTGCGTATCCGTACCCTGCTGCGCCGCGGCGTGGTCCGCGAGGCAGAGCAGGTGCAACTGGCCGATCTGCAGCTGG
ACGTGCTGCGGCGCAAGGTCAGCCGCCAGGGGCAGGTGATCGCCCTGACCAACAAGGAGTTCGCCCTCCTGCACCTGCTG
ATGCGCCGCGAGGGCGAGGTGCTGTCGCGCACCCTGATCGCCTCGGAGGTCTGGGACATGAACTTCGACAGCGACACCAA
CGTCGTCGACGTGGCGATCAAGCGCCTGCGCGCCAAGGTCGACAATCCCTTCCCGAACAAGCTGATCCATACCGTGCGCG
GCATCGGTTACGTCTGCGAGGAGCGCCCGTGCCCGCCCGCCGCTCCCTGA

Protein sequence :
MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTAR
DQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLQLDVLRRKVSRQGQVIALTNKEFALLHLL
MRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-50 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-49 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_25775 YP_008135535.1 transcriptional regulator BAC0125 Protein 4e-57 64
M062_25775 YP_008135535.1 transcriptional regulator BAC0197 Protein 5e-60 62
M062_25775 YP_008135535.1 transcriptional regulator BAC0308 Protein 4e-52 60
M062_25775 YP_008135535.1 transcriptional regulator BAC0083 Protein 3e-52 59
M062_25775 YP_008135535.1 transcriptional regulator BAC0111 Protein 1e-52 58
M062_25775 YP_008135535.1 transcriptional regulator BAC0638 Protein 2e-46 56
M062_25775 YP_008135535.1 transcriptional regulator BAC0347 Protein 5e-46 53
M062_25775 YP_008135535.1 transcriptional regulator AE000516.2.gene3505. Protein 6e-27 42
M062_25775 YP_008135535.1 transcriptional regulator U82965.2.orf14.gene. Protein 4e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_25775 YP_008135535.1 transcriptional regulator VFG0596 Protein 1e-50 57
M062_25775 YP_008135535.1 transcriptional regulator VFG1390 Protein 1e-29 44
M062_25775 YP_008135535.1 transcriptional regulator VFG1389 Protein 8e-25 43
M062_25775 YP_008135535.1 transcriptional regulator VFG0473 Protein 3e-21 42
M062_25775 YP_008135535.1 transcriptional regulator VFG1386 Protein 3e-27 41