Gene Information

Name : ECO26_5260 (ECO26_5260)
Accession : YP_003232142.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 5338708 - 5339166 bp
Length : 459 bp
Strand : -
Note : Integrative element ECO26_IE08

DNA sequence :
ATGAAAAAAATTATATTAAGTATCATTCTCATTTCAAATTCTTGTTATGCTTCTGATTGTTTTGAAATTACTGGAAAAGC
ATATAATATAGACCCATTAATATTAAAAGCAATTGCATGGAACGAATCAAAAAACAAAAACGGAATAAAAAGTAAAATAA
ACAAAAACGGAACGTATGATATAGGTATAATGCAAATAAATTCATCTCATTTAGATTTATTAAGCAAATTTAATATATCT
GAAGATGATTTATTGAATGATGCCTGTATAAACATATCTGTTGCTGGTTATATCTTAGCCTCTAACATAAAATCCAGGGG
GAATACATGGGATGCAGTTGGTGCGTATAATGCAGGCTACTTTAACACACCAAATGCAGTAGAACTCAGAAGACAATATG
CAATGAAAATATATAAAACATACACTAAATTAAAAAACAATGAACAAATTATCGATTAA

Protein sequence :
MKKIILSIILISNSCYASDCFEITGKAYNIDPLILKAIAWNESKNKNGIKSKINKNGTYDIGIMQINSSHLDLLSKFNIS
EDDLLNDACINISVAGYILASNIKSRGNTWDAVGAYNAGYFNTPNAVELRRQYAMKIYKTYTKLKNNEQIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK26704.1 unknown Not tested LEE Protein 5e-51 100
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 8e-51 100
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 8e-51 100
unnamed AAL57531.1 unknown Not tested LEE Protein 5e-51 100
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 5e-51 100
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 5e-51 100
unnamed AAC31524.1 L0045 Not tested LEE Protein 1e-49 98
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 2e-49 98
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 1e-49 98
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 2e-49 98
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 2e-48 96
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 1e-47 95
unnamed AAL06358.1 unknown Not tested LEE Protein 1e-48 93
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 9e-35 68
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 9e-35 68
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 2e-16 42
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 2e-16 42
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 2e-16 42
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 2e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_5260 YP_003232142.1 hypothetical protein VFG0823 Protein 6e-50 98
ECO26_5260 YP_003232142.1 hypothetical protein VFG0719 Protein 6e-48 95
ECO26_5260 YP_003232142.1 hypothetical protein VFG0539 Protein 7e-17 42