Gene Information

Name : PSTAB_0055 (PSTAB_0055)
Accession : YP_004712425.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 57751 - 59244 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAGCCTGACCTTCGCCGATTGGCAACAGCGTGCCCGTGACCTGCGTATCGAAGGTCGCGCCTTTATCCAGGGTGA
GTATTGCGCCGCGGCGCAGGGTGGCCAGTTCGACTGCATCAGCCCGGTGGACGGGCGGGTGCTGGCCCAGGTCGCCAGCT
GCGACCTGGCCGATGCCGAGCGTGCGGTGGCCAGCGCACGCGCCGCATTCGAGGCAGGCAGCTGGGCGAAGCTGGCGCCG
GCCAAGCGCAAGGCGGTGCTGATTCGCTTCGCCGATCTGCTGGAAGCGAACCGCGAGGAGCTGGCCCTGCTGGAGACCCT
CGACATGGGCAAGCCGATCGGCGACTCGCTGACGGTGGACATCCCCGGTGCGGCGCGGGCGCTGCGCTGGAGCGGCGAGG
CGATCGACAAGATCTACGACGAGGTAGCGGCCACGCCCCACGACCAGCTGGGCCTGGTCACCCGCGAGCCGGTCGGCGTG
GTGGCGGCCATCGTGCCGTGGAATTTCCCGCTGATGATGGCCTGCTGGAAGCTCGGCCCGGCACTGGCCACAGGCAACTC
GGTGGTGCTCAAGCCGTCCGAGAAGTCGCCGCTGACCGCCATCCGCATCGCCCGGCTGGCGATCGACGCCGGCATTCCGG
CCGGCGTGCTCAATGTCCTGCCAGGTTACGGCCACACCGTCGGCAAGGCGCTGGCGCTGCACATGGACGTCGATACCCTG
GTCTTTACCGGCTCCACGCGGGTGGCCAAGCAGCTGATGATCTACGCCGGCGAGTCGAACATGAAGCGTGTCTGGCTGGA
GGCGGGCGGCAAGAGCCCGAACATCGTCTTCGCCGATGCGCCCGACCTGCAGGCGGCTGCCCAGGCGGCGGCGGGTGCCA
TCGCCTTCAATCAGGGCGAGGTCTGCACTGCCGGTTCGCGGCTGCTGGTGGAGCGTTCGATCAAGGAGCGCTTCCTGCCC
ATGGTGGTGGAGGCGCTCAAGGGCTGGAAGCCGGGCAACCCGCTGGACCCTTCGACCAACGTCGGCGCCCTGGTGGACAC
CCAGCAGCTCAACACCGTGCTCGGCTACATCGACGCCGGGCGCCAGGCCGGCGCGCAGGTGCTGATCGGCGGCCAGCGGA
CGCTGGAGGAAACCGGCGGGCTGTACGTCGAGCCGACCATCTTCGATGGCGTCGACAATGCGATGAAGATCGCTCAGGAG
GAAATCTTTGGCCCGGTGCTCTCGGTGATCAGCTTCGACAGCGCCGAGGAAGCGGTGGCGATCGCCAACGACACGCCCTA
CGGCCTCGCTGCGGCGGTGTGGACCGCCGACCTGTCCAAGGCGCACCGCACCGCACGGGCGCTGCGCGCCGGCAGTGTGT
GGGTCAACCAGTACGACGGCGGCGACATGACCGCGCCGTTCGGCGGCTTCAAGCAGTCCGGCAACGGTCGTGACAAGTCG
CTGCATGCCTTCGACAAGTACACCGAGCTCAAGGCGACCTGGATTCAGCTCTGA

Protein sequence :
MPSLTFADWQQRARDLRIEGRAFIQGEYCAAAQGGQFDCISPVDGRVLAQVASCDLADAERAVASARAAFEAGSWAKLAP
AKRKAVLIRFADLLEANREELALLETLDMGKPIGDSLTVDIPGAARALRWSGEAIDKIYDEVAATPHDQLGLVTREPVGV
VAAIVPWNFPLMMACWKLGPALATGNSVVLKPSEKSPLTAIRIARLAIDAGIPAGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTRVAKQLMIYAGESNMKRVWLEAGGKSPNIVFADAPDLQAAAQAAAGAIAFNQGEVCTAGSRLLVERSIKERFLP
MVVEALKGWKPGNPLDPSTNVGALVDTQQLNTVLGYIDAGRQAGAQVLIGGQRTLEETGGLYVEPTIFDGVDNAMKIAQE
EIFGPVLSVISFDSAEEAVAIANDTPYGLAAAVWTADLSKAHRTARALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-113 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-68 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-68 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-58 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_0055 YP_004712425.1 aldehyde dehydrogenase family protein VFG0082 Protein 1e-68 43