Gene Information

Name : Riv7116_5722 (Riv7116_5722)
Accession : YP_007058635.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7211445 - 7212914 bp
Length : 1470 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGGTAACAGCAACCAGTCCGGAACAAAAAGTAAAAATCGGTCAAACTAAGCTGCTGATTAATAACGAATGGGTAGAAAG
TGTCAGCGGTAAAAGGTTTGAAACAATTAACCCCACTACTGGGGAAGTGATTTGTGATGTTGCAGAAGCAGATGCGGCTG
ATGTTGATAAGGCTGTAAAAGCGGCGAAAAGAGCTTTTGAAGGTGGAGAATGGCGGAATATGTCGGCAACTCGTCGCGGT
GAATTACTTTACAAGTTAGCTGACTTGATTGAGCAAAATATCGATGAGTTGGCGCGCTTGGAAACTTTAGATAACGGTAA
AACTTTAAAGGATGCCTACGGAGACTTGCATTTAGTTCTCCGTTGCTATCGTTATTATGCAGGTTGGGCAGATAAGGTAC
ACGGTAAAACCATTCCGATTAATGGCCCATATCTATGCTATACACGTCACGAACCCGTGGGGGTAGTTGGTCAAATTATT
CCTTGGAACTTTCCACTGTTAATGCAAGCATGGAAATTATCGCCAGCTTTGGCAACGGGTAATGTGGTGGTGATGAAAAC
AGCCGAACAAACACCTCTTTCGGCATTACGAGTCGGAGAATTAATCGTTGAAGCAGGCTTTCCACCCGGTGTAGTTAATA
TACTTTCGGGATATGGGCCTACCGCAGGAGCGGCGATCGCCCGTCACATGGACGTAGACAAGTTAGCGTTTACGGGTTCG
ACTGAGGTAGGACATTTGGTTATGGAAGCCGCCGCTAGAAGCAACCTCAAGCGGGTAACTCTGGAACTTGGTGGTAAAAG
TCCTAACATCGTTTTTGCTGATGCCGATATGGATGCAGCAATAGAAGGTGCCCATAAAAGCTTGTTCTTTAACCAAGGGC
AATGCTGTAATGCGGGTTCGCGGTTGTTTGTAGAAGAAAAATGTTACGACGAATTTGTTGCAAAAAGCGTCGAGAAAGCC
AAAAACCGTTTAGTTGGCGACCCCTTTGACTCCAAAACCCAACAGGGACCCCAGGTTGATCGCGATCAATTCGATAGAGT
CATGAACTATATCGAAGCGGGAATGCGCGAAGGTGCAAACATGATGTGCGGTGGACATCGAGTCGGCGATCGCGGTTACT
TTATCGAACCAACTGTATTTGCTAATGTCACAAACGACATGACAATTGCTCAAGAGGAGATTTTTGGGCCGGTAATGAGT
ATTATCAAATTCAAAGACATTGAAGAAGCAATTCATCTAGCAAATACTACTATGTATGGACTTGCTGCTGGAGTCTGGAC
AAAAGATATTACCAAAGCTCATAGAGTAGCAAATAGTGTCCGTGCCGGTACGGTATGGGTAAATTGCTATCACGTTTTTG
ATGCTGCTGCACCCTTCGGTGGTTTCAAGCAATCGGGTATGGGTAGAGAACTCGGCGAGTACTGCTTGGAACATTATACG
GAAGTTAAAACTGTCACCGTACAGTTGTAA

Protein sequence :
MVTATSPEQKVKIGQTKLLINNEWVESVSGKRFETINPTTGEVICDVAEADAADVDKAVKAAKRAFEGGEWRNMSATRRG
ELLYKLADLIEQNIDELARLETLDNGKTLKDAYGDLHLVLRCYRYYAGWADKVHGKTIPINGPYLCYTRHEPVGVVGQII
PWNFPLLMQAWKLSPALATGNVVVMKTAEQTPLSALRVGELIVEAGFPPGVVNILSGYGPTAGAAIARHMDVDKLAFTGS
TEVGHLVMEAAARSNLKRVTLELGGKSPNIVFADADMDAAIEGAHKSLFFNQGQCCNAGSRLFVEEKCYDEFVAKSVEKA
KNRLVGDPFDSKTQQGPQVDRDQFDRVMNYIEAGMREGANMMCGGHRVGDRGYFIEPTVFANVTNDMTIAQEEIFGPVMS
IIKFKDIEEAIHLANTTMYGLAAGVWTKDITKAHRVANSVRAGTVWVNCYHVFDAAAPFGGFKQSGMGRELGEYCLEHYT
EVKTVTVQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-91 48
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-93 48
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-93 48
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-93 48
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-89 48
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-93 48
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-78 42
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 4e-76 41
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 4e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_5722 YP_007058635.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 5e-92 48