Gene Information

Name : betB (PFL_5767)
Accession : YP_262825.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 6568803 - 6570275 bp
Length : 1473 bp
Strand : +
Note : identified by similarity to SP:P17445; match to protein family HMM PF00171; match to protein family HMM TIGR01804

DNA sequence :
ATGGCCCGTTTCGAACTGCAAAAACTCTACATCGACGGCGGCTACACCGATGCCGGCAGCGACGCCACTTTCGATGCCAT
CAACCCGGCCAACGGTGAAGTTCTCGCACAAGTGCAGCGTGCGACCAAGGAAGACGTTGAACGCGCCGTGGTCAGCGCCG
AGAAAGGCCAGAAGATCTGGGCCGCCATGACCGCCATGGAGCGTTCGCGCATCCTGCGTCGCGCCGTGGAAATCCTCCGC
GAGCGCAACGACGAACTGGCCGCCCTGGAAACCCTGGACACCGGCAAGGCCTTCTCCGAAACCAAGTACGTGGACATCGT
CACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCACCACTT
CCTTCGTCTACACCCGTCGCGAGCCCCTGGGCGTAGTGGCCGGTATCGGCGCGTGGAACTACCCGATCCAGATCGCCCTG
TGGAAATCCGCTCCAGCCCTGGCGGCCGGTAACGCGATGATCTTCAAACCGAGCGAAGTGACCTCGCTGACCACCCTGAA
ACTGGCCGAGATCTACACCGAAGCCGGCCTGCCGGATGGCGTGTTCAACGTCCTGACCGGCAGCGGCCGCGAAGTCGGCA
CCTGGCTGACCGAGCACCCGCGCATCGAGAAGGTCTCCTTCACCGGCGGCACCGACACTGGCAAGAAAGTCATGGCCAGC
GCTTCCAGCTCCTCGCTGAAAGACGTGACCATGGAACTGGGCGGCAAGTCGCCACTGATCATCTTCGACGACGCCGACCT
GGATCGCGCCGCCGACACCGCCATGATGGCCAACTTCTACAGCTCCGGTCAGGTCTGCACCAACGGCACTCGGGTATTCG
TACCGAGCCACCTGAAAGCCGCTTTCGAAGCCAAGATCGCCGAGCGCGTTGCGCGCATCCGCATCGGCAACCCGGAAGAC
GAAAACACCAACTTCGGCCCGCTGGTCAGTTTCCCGCACATGGAAAGCGTGCTGGGCTACATCGCCAAGGGTAAAGAAGA
AGGTGCCCGCGTACTGTGCGGCGGCGAGCGCCTGACCGACGGCGAATTCGCCAAGGGCGCCTTCGTTGCACCGACCGTGT
TCACCGACTGCACCGACGACATGACCATCGTCCGTGAAGAAATCTTCGGCCCGGTCATGGCGATCCTGACCTACGAAACC
GAAGAAGAAGTGATCCGCCGCGCCAACGACACCGACTTCGGCCTGGCTGCCGGCCTGGTCACCAAGGATCTGAACCGCGC
TCACCGCGTGATTCATCAGCTCGAAGCCGGTATCTGCTGGATCAACGCCTGGGGCGAGTCCGACGCCAAGATGCCGGTTG
GCGGCTACAAGCAGTCGGGCGTGGGCCGTGAGAACGGCATCAGCTCGCTGAACAACTTCACCCGCATCAAGTCGGTGCAG
GTCGAGCTGGGCGACTACGCCTCGGTGTTCTAA

Protein sequence :
MARFELQKLYIDGGYTDAGSDATFDAINPANGEVLAQVQRATKEDVERAVVSAEKGQKIWAAMTAMERSRILRRAVEILR
ERNDELAALETLDTGKAFSETKYVDIVTGADVLEYYAGLVPAIEGEQIPLRTTSFVYTRREPLGVVAGIGAWNYPIQIAL
WKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPDGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTDTGKKVMAS
ASSSSLKDVTMELGGKSPLIIFDDADLDRAADTAMMANFYSSGQVCTNGTRVFVPSHLKAAFEAKIAERVARIRIGNPED
ENTNFGPLVSFPHMESVLGYIAKGKEEGARVLCGGERLTDGEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILTYET
EEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQ
VELGDYASVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-72 41