Gene Information

Name : cskE (Cp1002_0050a)
Accession : YP_005680330.1
Strain : Corynebacterium pseudotuberculosis 1002
Genome accession: NC_017300
Putative virulence/resistance : Unknown
Product : Anti-sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 50997 - 51641 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence :
ATGACCCCCACAGGACACAGCGAACCTTTCGACGATTTCCCACACGATGTCGAAGCCCTGTTGGCGCAGGCACCTGCACC
AATAATCCCCTCGGCGCAATTACGAGACAACATCCTCGATGCCATTGCCGATATTCCCCAAGAGGAACCAGAAGCAACGC
ATGCGCCGCCGATCGATGTCCCAGCTGAGCCTATTGCGGATGTTATTCCGCTATCTGGGCGCCGTAAGTTTACGCGTGGG
TTTCTTGCCGTGGCGGCGTCGGTAGCCATAATCGCTGGCGGCTTTGCATTTTGGCCACAAGCAGACCCGCATGCAGAAAT
GCACAGTATTCTAGCGGCTTCTGATGTACGCCAGGCCAACACTCATGCCATGGGCGCATCACTGGACATTGTTGTGTCCT
CGTCAATGAATGAGGGCGGCGCGCTTGTTGATGGTGCACCCAAACTCAGCGAAGGCATGGGCGCACAGGTATGGGCAGTG
ATGGCAGACGGCTCCACAAAATCCGCCGGCGTTATCGGACCCGAGGATCACGATGGAGTATGGATGCCATTACCAGGGGA
AACCTCAAAGGTGATGATTACTGAGGAGCCACTCAAGGGCAGCTCTCAGCCACAGGGCACAGTCCTTGCCGTAGTAGATG
TGTAA

Protein sequence :
MTPTGHSEPFDDFPHDVEALLAQAPAPIIPSAQLRDNILDAIADIPQEEPEATHAPPIDVPAEPIADVIPLSGRRKFTRG
FLAVAASVAIIAGGFAFWPQADPHAEMHSILAASDVRQANTHAMGASLDIVVSSSMNEGGALVDGAPKLSEGMGAQVWAV
MADGSTKSAGVIGPEDHDGVWMPLPGETSKVMITEEPLKGSSQPQGTVLAVVDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cskE YP_005680330.1 Anti-sigma factor Not tested PiCp 2 Protein 1e-77 100
cskE YP_005682420.1 Anti-sigma factor Not tested PiCp 2 Protein 1e-77 100
cskE YP_003782452.1 anti-sigma factor Not tested PiCp 2 Protein 1e-77 100
cskE YP_005684511.1 Anti-sigma factor Not tested PiCp 2 Protein 1e-77 100
CD241_0095 YP_005124364.1 hypothetical protein Not tested Not named Protein 2e-38 54
DIP0098 NP_938495.1 hypothetical protein Not tested Not named Protein 1e-38 54