Gene Information

Name : DP0600 (DP0600)
Accession : YP_064336.1
Strain : Desulfotalea psychrophila LSv54
Genome accession: NC_006138
Putative virulence/resistance : Virulence
Product : Pho family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 657133 - 657807 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTACTCCTTATTGAAGATGACCTAACCATCGCAGACCTTATCCAAAAGGGTTTAGAAGAGGCAGGCTTTGCCGT
TGACTCCTGCCATAATGGCAGAGAGGGACTAAGCCACGCCCTCAAGGGTGCCTACTCTGCCGCAATTATAGACATCATGC
TCCCGGAACGGGATGGACTGAGCATTATTGAAGAGATGAGGGCAGCCGGCAAGGAGACCCCAGTACTGATCCTCAGCGCC
AAACAGTCCGTTGACGATAGAATCCAGGGGCTACAGAGGGGAGGCGATGACTATATGATCAAGCCCTTCTCCTTTGGCGA
ACTTCTTGTCCGGGTGCAGGCCCTGATCCGCCGGGACCAAAAACACTCTCCTCAGACAAGACTATCCATAGGACCACTGG
AGATGGACCTTCTCCGCCAGCAAGTATGCCGCGATGGCGGCCAGATAGAGCTCCCCGCCAAGGAGTATGCCCTCCTTCTC
TATATGGCAGAGAACGCAGGCACCGCCCTCTCCAAAACATCCATCCTGGAAAAGGTCTACGGCTACAACTTCGACCCCCA
GACCAACGTAGTGGACGTACTTGTCTGTCGACTGCGGGCCAAGATAGACAAGGGGTTTGGCCAACAGCTGATTCAAACTA
TCCGGGGTGTGGGCTATGTTCTTCGCAGCCACTAG

Protein sequence :
MKLLLIEDDLTIADLIQKGLEEAGFAVDSCHNGREGLSHALKGAYSAAIIDIMLPERDGLSIIEEMRAAGKETPVLILSA
KQSVDDRIQGLQRGGDDYMIKPFSFGELLVRVQALIRRDQKHSPQTRLSIGPLEMDLLRQQVCRDGGQIELPAKEYALLL
YMAENAGTALSKTSILEKVYGYNFDPQTNVVDVLVCRLRAKIDKGFGQQLIQTIRGVGYVLRSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-47 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-46 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DP0600 YP_064336.1 Pho family two-component response regulator BAC0638 Protein 3e-49 49
DP0600 YP_064336.1 Pho family two-component response regulator BAC0083 Protein 9e-49 47
DP0600 YP_064336.1 Pho family two-component response regulator BAC0125 Protein 6e-46 45
DP0600 YP_064336.1 Pho family two-component response regulator BAC0308 Protein 8e-46 45
DP0600 YP_064336.1 Pho family two-component response regulator BAC0347 Protein 5e-47 44
DP0600 YP_064336.1 Pho family two-component response regulator BAC0111 Protein 4e-48 44
DP0600 YP_064336.1 Pho family two-component response regulator BAC0197 Protein 3e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DP0600 YP_064336.1 Pho family two-component response regulator VFG0596 Protein 6e-48 48
DP0600 YP_064336.1 Pho family two-component response regulator VFG1389 Protein 3e-39 41