Name : chpC (CMM_0052) Accession : YP_001220791.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Virulence Product : serine protease Function : - COG functional category : - COG ID : - EC number : - Position : 70785 - 71645 bp Length : 861 bp Strand : - Note : putative extracellular serine protease, family S1 (chymotrypsin) (YP_063162.1| pat1 protein [Leifsonia xyli subsp. xyli str. CTCB07]). pfam00089, Trypsin, Trypsin.; Function unclear DNA sequence : ATGTCAAAAACGCATTTTCGCGGTATTTACTTTATTGTCATTCCCATCGCTCTTGGGCTAATGGCCGCCAGTTCTACGGT TTGGAGCGCGTTCGCTACCGAGGGCGCCAGGCAGACACGACCAGTAATTGCGGGTTCGCAGCTTGAATTCGAGTTCGGCG GCGATTGCACTGCAGGTGCTGTGGTACAAAAAAATAGTTGGAGTGCAGTGTTCTTCGCAAAAGAGCGCGCGACTAGATAC GTAGTGACTGCTAATCACTGTGTTGCGCGCATAGGGGAAAGGGTATTTGTTAGAAACGAGCTCGAGTCTCGTCACGGTCA TGTTCCCCCCATCGGAACGGTTTATTGGAGATCTGATGACGTCGATCTAGCGTTAATTAAAATTGATCCCATTGTTCACG TGTCGTACACGTGTGGGAGTTCTTCACATGGCGCGCCCCACTGCTTGCCGGTGACCACCTGGACGCCAAACGCCCTTCCT CGGGTGCTCACCGCGTCGCTGAGAATGCGGAGCATATATGCCCAACCCGTAATCGGGTACGATAACCCCGGGCTGAATGA AGCTTTTGCTACAAGCGGTAGCACCACTGGTGTACAGGTGAACTGGCGGAATCTATCCGTTCGTGCTTGGCCACCGGGTT TCAGGGACCCTCGAAGCGGAGACCAAGCAGCATCTTCCACAACTGACTTTTTGCTTCCGGGAGATTCCGGAGGGCCTGTA TTTAACCCGGATACGGGTATGCTATACGGAATAATGACCGATCAAGTTCCTCATCGTCTCACAGAGCAGAGCACGATGGT GTATATCAAGCTATCTCAGTTTTTCCATGAGCAGAGAGAATACAATCTCGTGACACGTTGA Protein sequence : MSKTHFRGIYFIVIPIALGLMAASSTVWSAFATEGARQTRPVIAGSQLEFEFGGDCTAGAVVQKNSWSAVFFAKERATRY VVTANHCVARIGERVFVRNELESRHGHVPPIGTVYWRSDDVDLALIKIDPIVHVSYTCGSSSHGAPHCLPVTTWTPNALP RVLTASLRMRSIYAQPVIGYDNPGLNEAFATSGSTTGVQVNWRNLSVRAWPPGFRDPRSGDQAASSTTDFLLPGDSGGPV FNPDTGMLYGIMTDQVPHRLTEQSTMVYIKLSQFFHEQREYNLVTR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
chpC | YP_001220791.1 | serine protease | Virulence | chp/tomA region | Protein | 2e-133 | 100 |