Gene Information

Name : irlR6 (AXYL_06101)
Accession : YP_003982109.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : transcriptional activator protein IrlR 6
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6571321 - 6572019 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
ATGCGTTTGCTGGTTGTGGAAGACGAACCAAAGACGGCATCGCACATCAAGCGCGGGCTGACTGGATTGGGCTTTACCGT
CGACTTGTCCGGCGATGGGAGCGAGGGGCTGTTCCTGGCCATCGAGCATGACTACGACGCAATCATCCTGGACGTCATGC
TTCCCGGCCAGGACGGCTACGCACTGCTGAGACAACTGCGGGCGCGCAAGCCGACGCCGGTGCTGATGCTCTCGGCCCGT
GGCTCCGTCGACGAGCGGGTCAAGGGACTGCGCCAGGGCGCTGACGACTACCTGGGCAAGCCATTTTCCTTCATCGAGCT
GGCCGCGCGCATCCAGGCCCTGCTGCGGCGCCGGGTCGGCACCGGCGGCGATTCGACCTGGTTGCAGGTGGGCGACCTCC
AGGTCGATCTGCTGGCGCGCCGTGCCACCCGCGCCGGCCAGCGGCTGAACCTGACCGCCAAGGAGTTCGCGCTGCTCAGC
CTGCTGGCACGCCACCAGGGCGAGATCCTGTCCAAGATGATGATCTCCGAGCAGATCTGGGACATGAACTTCGACAGCGA
CGCGAACGTGGTCGAAGTCGCGATGCGGCGCTTGCGTCTCAAGGTTGACGCGCCATACGACACGAAGTTGCTGCATACCG
TCAGGGGCATGGGCTATCTGCTGGAAAGCCGCGCCGAAGCCTGCGCCGCCTCGCCATGA

Protein sequence :
MRLLVVEDEPKTASHIKRGLTGLGFTVDLSGDGSEGLFLAIEHDYDAIILDVMLPGQDGYALLRQLRARKPTPVLMLSAR
GSVDERVKGLRQGADDYLGKPFSFIELAARIQALLRRRVGTGGDSTWLQVGDLQVDLLARRATRAGQRLNLTAKEFALLS
LLARHQGEILSKMMISEQIWDMNFDSDANVVEVAMRRLRLKVDAPYDTKLLHTVRGMGYLLESRAEACAASP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-47 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-46 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0083 Protein 2e-55 58
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0197 Protein 3e-55 56
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0125 Protein 8e-56 54
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0111 Protein 1e-52 54
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0638 Protein 1e-46 53
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0347 Protein 4e-45 49
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 BAC0308 Protein 3e-44 48
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 NC_002516.2.879194.p Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 VFG0596 Protein 5e-48 50
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 VFG1389 Protein 7e-30 47
irlR6 YP_003982109.1 transcriptional activator protein IrlR 6 VFG1390 Protein 3e-32 42