Gene Information

Name : sciO (RALTA_A0619)
Accession : YP_002004671.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Unknown
Product : replication/virulence associated protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 641402 - 642745 bp
Length : 1344 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12437215, 15972528; Product type ph : phenotype

DNA sequence :
ATGAGCTGGTACAACAAGGTCGTCTGGAGCGAAGGCTTGTTCCTGCGCCCGCAACTCTTTCAGCAACAGGAGCGCTATCT
GGAACACTACGCACACAAGCGTAGCGCCGCGCTGAGCCCGTTCTTCTGGGGCTTTCACCATTTCTCGATCGATGCCGAAG
CGCTCTCGCTCGGCAAGCTGGTGGTAGCAAGCGCCGCGGGGATTTTCCAGGACGGCACGCCCTTTGATGCCCCTGCTCAC
ACGGCAGTGCCGGCACCCCTTGCGCTGCTGCCCGAGCACCTGAATCAGATCATCTATCTTGCGGTGCCGATTCGCACGCC
AAATGCGGAAGAGATGAGTTTCGGGGATGCCAGGGACTCCTTGGCGCGTTACCGTGCCTTTGAGCACGAGCTGCTGGATG
CCAATTCGATCGCACAGGGACCGAAACTGGTGCAGTTGGCAGACTTGCGTCTTCGGCTATTGCCGGAGAGAGAGCTTTCC
GAATCCTGGCTTGGCCTGCCGTTGACAAGCGTGGCAGAAATTCGCGCCGATGGCAGTGCCAGACTGGATGCGGCACTGAT
TCCGCCGGTCAATGTCTACGCCGCCAGCGCATTGCTTCAGGCGTGGCTTACCGAGATCCACGGCCTCGTGCATCTCAGGG
CCGATGCGATGGCGGAGCGTCTGTCTGCTGCCTCAATGCGGGGCGGGGATGCCGCCGAGGTATCGGAATACCTGATTCTC
CAATTGCTGAACCGGTATGAGCCGATTCTGACCCACTTGCTGCATGCCAAGGCCGCGTCGCCAGAGGCGTTGTACATGCA
CCTGGCGGCGTTGTCCGGGGAACTGTCGACGTTCGTGCGCACCCAGACCCGTCGGCCTGCGGGGCATGCTGCCTATCGGC
ACGATGCCCCGCATCTTTGCCTCAAGCCATTGGTAGATGACCTGCGCTTCCTGCTCAATGTGGTGCTGGAGCGCGCCGCG
CAGCGGATTGACATCACGGAGCAGTCTCACGGGATTCGGCTGGCAGTGCTGGATCCGAGCGAGATCAGCCGCTTCCCGAC
TTTTGTGCTGGCAGTCGCCGCGCAGATTCCCGCGGATCTGTTGCAGCAGCAGTTCCCGGCCCAGACCAAGGTGGGGCCAT
CCGGGCGCCTGGCGGAACTGGTTCGCTCCCATCTTCCTGGCATTCCGCTGCAGCCCCTGCCGGTGCCGCCCCGTCAGATT
CCGTTCCATGCTGGTCATGTCTATTTTGAGCTGTCGCAGCAGCATCCCCTCTGGGATCAGGTGGCGCAGTACGGCGGGCT
GGCGCTGCACGTGGCGGGGACCTTTCCTGAATTGCGCATGGAACTGTGGGGAGTGCGGCAATGA

Protein sequence :
MSWYNKVVWSEGLFLRPQLFQQQERYLEHYAHKRSAALSPFFWGFHHFSIDAEALSLGKLVVASAAGIFQDGTPFDAPAH
TAVPAPLALLPEHLNQIIYLAVPIRTPNAEEMSFGDARDSLARYRAFEHELLDANSIAQGPKLVQLADLRLRLLPERELS
ESWLGLPLTSVAEIRADGSARLDAALIPPVNVYAASALLQAWLTEIHGLVHLRADAMAERLSAASMRGGDAAEVSEYLIL
QLLNRYEPILTHLLHAKAASPEALYMHLAALSGELSTFVRTQTRRPAGHAAYRHDAPHLCLKPLVDDLRFLLNVVLERAA
QRIDITEQSHGIRLAVLDPSEISRFPTFVLAVAAQIPADLLQQQFPAQTKVGPSGRLAELVRSHLPGIPLQPLPVPPRQI
PFHAGHVYFELSQQHPLWDQVAQYGGLALHVAGTFPELRMELWGVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0304 NP_454884.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-111 57