Gene Information

Name : opuBD (Cp1002_0056)
Accession : YP_005680336.1
Strain : Corynebacterium pseudotuberculosis 1002
Genome accession: NC_017300
Putative virulence/resistance : Unknown
Product : Choline transport system permease protein opuBD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 56068 - 56706 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence :
ATGAGGTGGCTACGTCATGCGTGGCCATATGTGCTGGATATGGCAGCAGCCCATCTCTTCCTCAGTATTCCAGCAATCCT
TATTAGTATCGCGGTCTCCATCCCCATCGGCATGTTTGCCGCCCGCAATCCGCGCGTAGGAAACCTAGTGGTATCCGCGG
CCTCCCTGGCTTATACAATCCCCGCCCTTCCTATGCTGATATTGGTTCCTTTCATCGTGGGAGTACCCCTGCGATCAGAT
ACTAACGTCATTATCGCGCTATGCATCTATGGAGTCGCTCTTCTTGCACGTACTGCAACAGATGCTTTTCGTTCCATACC
TGAGGACGTGCGCATGTCCGCATCTGCCCAAGGCATGAGTGCGCCCCAGGTTGCGTTAAAGGTTGATCTGCCTCTTGCTA
TTCCGGTATTAATCTCCGGCATTCGCGTGCTCGGTGTCTCCACTATTGGCCTGGTGACCATCGGCGCATTAATAGGAGTG
TCTAGCCTGGGAACACTGTTTACTGATGGTTTTCAACGCAATATTACTGCTGAGGTACTCACTGGTATAGGTGCTGTAGT
CATACTCGCGGTGCTTTTCGACGTCCTCTGTCTCATCCTTCAACGCGTACTCGCACCTTGGTCGGTGATAAAGAAATGA

Protein sequence :
MRWLRHAWPYVLDMAAAHLFLSIPAILISIAVSIPIGMFAARNPRVGNLVVSAASLAYTIPALPMLILVPFIVGVPLRSD
TNVIIALCIYGVALLARTATDAFRSIPEDVRMSASAQGMSAPQVALKVDLPLAIPVLISGIRVLGVSTIGLVTIGALIGV
SSLGTLFTDGFQRNITAEVLTGIGAVVILAVLFDVLCLILQRVLAPWSVIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBD NP_938493.1 choline transport system permease Not tested Not named Protein 3e-67 75
opuBD YP_005124362.1 choline transport system permease protein Not tested Not named Protein 2e-67 74