Gene Information

Name : BJ6T_66370 (BJ6T_66370)
Accession : YP_005611474.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6789445 - 6790146 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
TTGACCGCCGCCGAACGCACGATGCGCCTCCTCATCATCGAAGACGACCGCGAATCCGCCGACTATCTCGTGAAGGCGTT
TCGCGAAGTCGGACACATTGCCGACCACGCCGCCGACGGCGAGGAGGGCCTCGCCATGGCCGATAACGGCGATTACGACG
TGCTGGTGGTCGACCGCATGCTGCCCAAGCGCGACGGCCTGTCGCTGATCGGTGCGCTACGCGACAAGGACGACTCGACG
CCGGTGCTGATTCTCTCCGCGCTCGGGCAGGTCGACGACCGCATCAAGGGCCTGCGCGCCGGCGGCGACGACTATCTGCC
GAAGCCTTATTCCTTTGCCGAGCTGCTGGCCCGGGTCGAGGTGCTGTCGCGGCGCCGCGGCGGTCCGGCCGAGGACACGC
TCTACCGCGTCGGCGATCTCGAGCTTGACCGGCTGTCCCATCGCGTCGCCCGCGGCAAGGACGAGCTGACGCTCCAGCCG
CGCGAATTCCGCCTGCTCGAATACCTCATGAAGCATGCCGGCCAGGTGGTGACCCGCACCATGCTGCTGGAGAACGTCTG
GGACTACCATTTCGATCCGCAGACCAACGTGATCGACGTGCACATTTCGCGGCTGCGCTCCAAGATCGACAAGGGTTTTG
AGCGGCCGCTGCTGCACACGATCCGCGGCGCCGGGTACATGATCCGGGATGGGATCCGTTAA

Protein sequence :
MTAAERTMRLLIIEDDRESADYLVKAFREVGHIADHAADGEEGLAMADNGDYDVLVVDRMLPKRDGLSLIGALRDKDDST
PVLILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRRGGPAEDTLYRVGDLELDRLSHRVARGKDELTLQP
REFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFERPLLHTIRGAGYMIRDGIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0125 Protein 3e-49 47
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0083 Protein 4e-46 46
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0197 Protein 7e-45 46
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0111 Protein 1e-52 45
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0308 Protein 2e-43 44
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0347 Protein 5e-46 43
BJ6T_66370 YP_005611474.1 two-component response regulator BAC0638 Protein 5e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_66370 YP_005611474.1 two-component response regulator VFG1389 Protein 5e-35 45
BJ6T_66370 YP_005611474.1 two-component response regulator VFG0596 Protein 2e-38 42