Gene Information

Name : STU288_03315 (STU288_03315)
Accession : YP_007901768.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 chaperone protein SscA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 699794 - 700267 bp
Length : 474 bp
Strand : +
Note : COG0457 FOG: TPR repeat

DNA sequence : 
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTCTGTATCGCTATGCCACGCAGCTTATGGAGGTAAAAGAATTCGCCGGCG
CAGCGCGACTTTTTCAATTGCTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTGTTATGCAATCAAAGCGTTAAAGGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATTCTCCGACAGCGTGCAGAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence : 
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYATQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRQRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 3e-70 100
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 2e-70 100
sscA CAA12186.1 SscA Virulence SPI-2 Protein 2e-70 100
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 1e-69 99
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 7e-69 99
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 7e-69 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_03315 YP_007901768.1 pathogenicity island 2 chaperone protein SscA VFG0500 Protein 9e-71 100