Gene Information

Name : Sinac_6762 (Sinac_6762)
Accession : YP_007206527.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8534007 - 8534681 bp
Length : 675 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator

DNA sequence :
ATGAAGTTGTTGCTCATCGAGGATGACCGCAGGGTTGCCGCCTATCTTCGCAAGGGAATCGTCGAGGCGGGTTTCGCGGT
CGATATCGCTCACCGAGGGGATGACGGGCTGCACCTCGCGCGGGTCGGTGATTACGATCTCATCGTCCTCGATGTGATGC
TCCCCGGCTGCGACGGCTGGTCCGTGATCGCCGACTTGAGGGCAGCGGGCCGGTACACGCCGGTCTTATTCCTGTCTGCG
ATGGACGCCGTCTCCGATCGCGTGCGGGGATTGGAGTTGGGGGCGGACGATTACCTCGTCAAGCCATTCGCCTTCTCGGA
GTTCCTCGCCCGGGTGCGGACCGTTATCCGGCGAGGCTCGACCCGGCAGAATGAGATCCTCCGCGTCGGCGACCTCGAAG
TCGATACGGTGCGGTTCGCCGCGAGCCGCTCGGGCCGCAAGCTCGACTTGACGCCGAAGGTGTTCAGCCTGCTCGCCCTG
CTCGCAAGGCGGGCAGGCGACGTGCTGTCTCGGACACTCATCGCCGAACAGGTCTGGGACATGAACTTCGACAGCGACTC
GAACGTGATCGATGTCCAAGTCCGCCGCCTCCGCTCGAAAGTCGATGACCCGTTCCCATCCAAGCTCATCCACACGGTCC
GCGGGGTGGGTTATGTCCTCGAAGTCCGAGACTAA

Protein sequence :
MKLLLIEDDRRVAAYLRKGIVEAGFAVDIAHRGDDGLHLARVGDYDLIVLDVMLPGCDGWSVIADLRAAGRYTPVLFLSA
MDAVSDRVRGLELGADDYLVKPFAFSEFLARVRTVIRRGSTRQNEILRVGDLEVDTVRFAASRSGRKLDLTPKVFSLLAL
LARRAGDVLSRTLIAEQVWDMNFDSDSNVIDVQVRRLRSKVDDPFPSKLIHTVRGVGYVLEVRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-53 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-52 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0125 Protein 2e-65 61
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0083 Protein 4e-63 60
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0197 Protein 2e-64 59
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0111 Protein 7e-64 58
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0308 Protein 6e-63 57
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0638 Protein 1e-57 57
Sinac_6762 YP_007206527.1 heavy metal response regulator BAC0347 Protein 4e-57 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_6762 YP_007206527.1 heavy metal response regulator VFG0596 Protein 2e-53 54
Sinac_6762 YP_007206527.1 heavy metal response regulator VFG1389 Protein 2e-31 46
Sinac_6762 YP_007206527.1 heavy metal response regulator VFG1390 Protein 2e-38 43