Gene Information

Name : STU288_03430 (STU288_03430)
Accession : YP_007901791.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 715704 - 716762 bp
Length : 1059 bp
Strand : +
Note : COG4792 Type III secretory pathway, component EscU

DNA sequence :
ATGAGCGAGAAAACAGAACAGCCTACAGAAAAGAAATTACGTGATGGCCGTAAGGAAGGGCAGGTTGTCAAAAGTATTGA
AATAACATCATTATTTCAGCTGATTGCGCTTTATTTGTATTTTCATTTCTTTACTGAAAAGATGATTTTGATACTGATTG
AGTCAATAACTTTCACATTACAATTAGTAAATAAACCATTTTCTTATGCATTAACGCAATTGAGTCATGCTTTAATAGAG
TCACTGACTTCTGCACTGCTGTTTCTGGGCGCTGGGGTAATAGTTGCTACTGTGGGTAGCGTGTTTCTTCAGGTGGGGGT
GGTTATTGCCAGCAAGGCCATTGGTTTTAAAAGCGAGCATATAAATCCGGTAAGTAATTTTAAGCAGATATTCTCTTTAC
ATAGCGTAGTAGAATTATGTAAATCCAGCCTAAAAGTTATCATGCTATCTCTTATCTTTGCCTTTTTCTTTTATTATTAT
GCCAGTACTTTTCGGGCGCTACCGTACTGTGGGTTAGCCTGTGGCGTGCTTGTGGTTTCTTCTTTAATAAAATGGTTATG
GGTAGGGGTGATGGTTTTTTATATCGTCGTTGGCATACTGGACTATTCTTTTCAATATTATAAGATTAGAAAAGATCTAA
AAATGAGTAAAGATGACGTAAAACAGGAGCATAAAGATCTGGAGGGCGACCCTCAAATGAAGACGCGGCGTCGGGAAATG
CAGAGTGAAATACAAAGTGGGAGTTTAGCTCAATCTGTTAAACAATCTGTTGCGGTAGTGCGTAATCCAACGCATATTGC
GGTTTGTCTTGGCTATCATCCCACCGATATGCCAATACCACGCGTCCTGGAAAAAGGCAGTGATGCTCAAGCTAACTATA
TTGTTAACATCGCTGAACGCAACTGCATCCCCGTTGTTGAAAATGTTGAGCTGGCCCGCTCATTATTTTTTGAAGTGGAA
CGCGGAGATAAAATTCCTGAAACGTTATTTGAACCCGTTGCAGCCTTGTTACGTATGGTGATGAAGATAGATTATGCGCA
TTCTACCGAAACACCATAA

Protein sequence :
MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALYLYFHFFTEKMILILIESITFTLQLVNKPFSYALTQLSHALIE
SLTSALLFLGAGVIVATVGSVFLQVGVVIASKAIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYY
ASTFRALPYCGLACGVLVVSSLIKWLWVGVMVFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEHKDLEGDPQMKTRRREM
QSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVE
RGDKIPETLFEPVAALLRMVMKIDYAHSTETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaU CAA68202.1 secretion system apparatus, SsaU Virulence SPI-2 Protein 3e-159 100
ssaU NP_460387.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 3e-159 100
ssaU NP_456106.1 putative type III secretion protein Virulence SPI-2 Protein 6e-159 99
ssaU NP_805093.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 6e-159 99
ssaU YP_216430.1 secretion system apparatus protein SsaU Virulence SPI-2 Protein 3e-157 99
YPO0273 YP_002345355.1 secretion system apparatus protein SsaU Virulence Not named Protein 9e-72 48
escU AFO66307.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-52 41
escU AFO66403.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-52 41
unnamed AAL06357.1 EscU Virulence LEE Protein 5e-49 41
escU AAK26703.1 EscU Virulence LEE Protein 2e-50 41
escU YP_003223487.1 T3SS structure protein EscU Virulence LEE Protein 3e-50 41
escU AAL57530.1 EscU Virulence LEE Protein 2e-50 41
escU YP_003232141.1 secretion system apparatus protein SsaU Virulence LEE Protein 2e-50 41
escU CAI43886.1 EscU protein Virulence LEE Protein 2e-50 41
escU CAC81850.1 EscU protein Virulence LEE II Protein 2e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_03430 YP_007901791.1 secretion system apparatus protein SsaU VFG0522 Protein 1e-159 100