Gene Information

Name : sigD (CDB402_0064)
Accession : YP_005126578.1
Strain : Corynebacterium diphtheriae INCA 402
Genome accession: NC_016783
Putative virulence/resistance : Unknown
Product : ECF-family sigma factor D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 66722 - 67282 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence :
ATGGATCCCGATGATTTGCTCGTCGCGGTTGCTTCTGGTGACCAAGCGGCTTTCGCGCAGCTTTATGACCAGCTCGCGCC
CTATGTTTTAGGCCTGAGCACTCAGGTGATTCATGATCGTGCGCAGGCAGAGGAAGTAACCCAAGAGGTTTTTGTCGAGG
TGTGGCGCACTGCGCCGAGTTTCGACGCCTCCCGTGGTTCGGCACGGTCGTGGATTTTGCGGTTGGCTCGGTCGCGGGCT
ATTGATCGCGTTCGTTCTGATATTGCTTCGAAAAAGCGCGATACCACTGATTTTCTCCATAGCGCCACCACATGGTGTGC
CGCTGAGGAGGAAGCGGTGGAGTCTTTGGAGTCGCAGCAGGTTCGTGCGCTTGTCGATTCCATTGGCGAGCCACACCGGA
CGGCCATTATGTTGTCGTATTTCCAAGGTCTTACTCATAGCGAGATTGCAGAGGCCACGGGCGTTCCGTTGGGAACAGCG
AAAACACGGCTACGCGACGGCTTGAAAAAACTACGTCAGATTGTTCACCCCCATTTATCTGCGACGGGAGCAGCACGATG
A

Protein sequence :
MDPDDLLVAVASGDQAAFAQLYDQLAPYVLGLSTQVIHDRAQAEEVTQEVFVEVWRTAPSFDASRGSARSWILRLARSRA
IDRVRSDIASKKRDTTDFLHSATTWCAAEEEAVESLESQQVRALVDSIGEPHRTAIMLSYFQGLTHSEIAEATGVPLGTA
KTRLRDGLKKLRQIVHPHLSATGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigD YP_005124365.1 ECF-family sigma factor D Not tested Not named Protein 2e-75 100
DIP0099 NP_938496.1 RNA polymerase sigma factor Not tested Not named Protein 1e-75 100
sigK YP_005682421.1 ECF family sigma factor K Not tested PiCp 2 Protein 9e-55 76
sigK YP_005684512.1 ECF family sigma factor K Not tested PiCp 2 Protein 6e-55 76
sigK YP_005680331.1 ECF family sigma factor K Not tested PiCp 2 Protein 2e-53 75
sigK YP_003782453.1 ECF family sigma factor K Not tested PiCp 2 Protein 7e-55 75