Gene Information

Name : Dda3937_02280 (Dda3937_02280)
Accession : YP_003881463.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 740821 - 741522 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence :
ATGAGACTATTGCTGGTAGAAGACCAAACCATGGCGGCGGATTACATCTCCAAAGGGCTCAAGGAGAATGATTTCGTGGT
CGATGTCGCCCACGATGGCGTGGATGGCCTGCATTATCTGCTGACCAACGATTATGATCTGGCGATCCTCGACGTCATGC
TGCCCGGTATGAGCGGCTGGAAAATTCTGGAGCTGGCGCGTCAGGCCGGGAAACCGACCCCGGTCATGTTCCTGACGGCG
CGCGACGAGGTAGAGGACCGGGTGCGTGGTCTGGAGCTGGGCGCGGAAGATTATCTGATCAAACCCTTTTCCTTTAGCGA
ACTGCTGGCGCGGGTGCGCGTGATTATGCGGCGGCAGGCGGTACATATGCCGGCGGTAGAGGAGTCCGTGCTGCAAATCA
GCAACTTGCAGTTGGATTTCTTGAAACATCGCGTGTCGCGCGGTGGGAAACGCATCGAGCTGACGCAAAAAGAATTTTTG
CTGTTGAGCCTGTTGATGCGTCGCAGCGGCGAAGTGCTGTCGCGCACCGTGCTGGCGGAGCAGGTTTGGGACATGAATTT
TGACCCTGAAACGAACGTCATTGACGTGGCGATTCGCCGGCTGCGCAGCAAAATCGATGATGATTATGAGGTCAAACTGC
TGCACACCATCCGCGGCGCCGGATATGTCCTGGAAGTGAGAAATGATGCTGATACCGCGTAA

Protein sequence :
MRLLLVEDQTMAADYISKGLKENDFVVDVAHDGVDGLHYLLTNDYDLAILDVMLPGMSGWKILELARQAGKPTPVMFLTA
RDEVEDRVRGLELGAEDYLIKPFSFSELLARVRVIMRRQAVHMPAVEESVLQISNLQLDFLKHRVSRGGKRIELTQKEFL
LLSLLMRRSGEVLSRTVLAEQVWDMNFDPETNVIDVAIRRLRSKIDDDYEVKLLHTIRGAGYVLEVRNDADTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-57 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-56 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0083 Protein 5e-68 60
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0125 Protein 2e-63 59
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0197 Protein 3e-65 58
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0638 Protein 1e-60 57
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0111 Protein 1e-64 54
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0308 Protein 1e-60 53
Dda3937_02280 YP_003881463.1 two-component response regulator BAC0347 Protein 1e-57 51
Dda3937_02280 YP_003881463.1 two-component response regulator HE999704.1.gene1528. Protein 4e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dda3937_02280 YP_003881463.1 two-component response regulator VFG0596 Protein 1e-57 54
Dda3937_02280 YP_003881463.1 two-component response regulator VFG1390 Protein 1e-38 41