Name : sigD (CDHC04_0066) Accession : YP_005139377.1 Strain : Corynebacterium diphtheriae HC04 Genome accession: NC_016788 Putative virulence/resistance : Unknown Product : ECF family sigma factor D Function : - COG functional category : - COG ID : - EC number : - Position : 66606 - 67166 bp Length : 561 bp Strand : - Note : - DNA sequence : ATGGATCCCGATGATTTGCTCGTCGCGGTTGCTTCTGGTGACCAAGCGGCTTTCGCGCAGCTTTATGACCAGCTCGCGCC CTATGTTTTAGGCCTGAGCACTCAGGTGATTCATGATCGTGCTCAGGCAGAGGAAGTAACCCAGGAGGTTTTTGTCGAGG TGTGGCGCACTGCGCCGAGTTTCGACGCCTCCCGTGGTTCGGCACGGTCGTGGATTTTGCGGTTGGCTCGGTCGCGGGCT ATTGATCGCGTTCGTTCTGATATTGCTTCGAAAAAGCGCGATACCACTGATTTTCTCCATAGTGCCACCACATGGTGTGC CGCTGAGGAGGAGGCGGTGGAGTCTTTGGAGTCGCAGCAGGTTCGTGCGCTTGTCGATTCCATTGGCGAACCACACCGGA CGACCATTATGTTGTCGTATTTCCAAGGTCTTACTCATAGCGAGATTGCAGAGGCCACGGGCGTTCCGTTGGGAACAGCG AAGACACGGCTACGCGACGGCTTGAAAAAACTACGTCAGATTGTTCACCCCCATTTATCTGCGACGGGAGCAGCCCGATG A Protein sequence : MDPDDLLVAVASGDQAAFAQLYDQLAPYVLGLSTQVIHDRAQAEEVTQEVFVEVWRTAPSFDASRGSARSWILRLARSRA IDRVRSDIASKKRDTTDFLHSATTWCAAEEEAVESLESQQVRALVDSIGEPHRTTIMLSYFQGLTHSEIAEATGVPLGTA KTRLRDGLKKLRQIVHPHLSATGAAR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sigD | YP_005124365.1 | ECF-family sigma factor D | Not tested | Not named | Protein | 2e-75 | 99 |
DIP0099 | NP_938496.1 | RNA polymerase sigma factor | Not tested | Not named | Protein | 1e-75 | 99 |
sigK | YP_005682421.1 | ECF family sigma factor K | Not tested | PiCp 2 | Protein | 1e-54 | 75 |
sigK | YP_005680331.1 | ECF family sigma factor K | Not tested | PiCp 2 | Protein | 3e-53 | 75 |
sigK | YP_003782453.1 | ECF family sigma factor K | Not tested | PiCp 2 | Protein | 9e-55 | 75 |
sigK | YP_005684512.1 | ECF family sigma factor K | Not tested | PiCp 2 | Protein | 7e-55 | 75 |