Gene Information

Name : Snov_0735 (Snov_0735)
Accession : YP_003692685.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 759215 - 760006 bp
Length : 792 bp
Strand : +
Note : KEGG: azc:AZC_1137 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver

DNA sequence :
ATGAGTTCGAATCCCACCGTTGCCTCCGATTCCCGCCGGTCGCATGACGGTCCCGTCATCGACCTCGCGGACCTCCGGAA
GGCCGCCAGAGACTCCGCCCAAGAGCCCGCCATGCGCCTGCTGATCGTCGAGGACGACCGTGACGCCGCCGACTATCTGC
GCAAGGCGTTCCGCGAGGCCGGCCATGTGGTCGACGTCGCCTCCGACGGCGAGGAGGGGCTCATGCTGGCGCGCGAGGGC
GGCTACGACGTGCTTCTCGTCGACCGCATGCTGCCGCGCCGCGACGGCCTCGCGCTGATCGCCGAGCTGCGCGGGCGCGG
CGACAAGACCCCGGCGCTGATCCTCTCCGCCCTCGGCCAGGTCGATGACCGCGTCACCGGCCTGCGCGCCGGCGGCGACG
ACTATCTGCCCAAGCCCTACGCCTTCTCCGAGCTGCTCGCCCGCGTCGAGGCGCTGGCGCGGCGCGGCGGCCCGCAGGCG
GCCGATACGGTCTATCGCGTCGCCGACCTCGAGCTCGACCGGCTGGCGCACCGCTGCACCCGCGCCGGCCAGGAGATCGT
GCTGCAGCCGCGCGAGTTCCGGCTGCTCGAATATCTCATGCGCCATGCCGGGCAGGTGGTGACCCGCACCATGCTGCTGG
AGAACGTGTGGGACTATCATTTCGATCCGCAGACCAACGTCATCGACGTCCACGTCTCGCGGCTGCGCTCCAAGATCGAC
AAGGGCTTCGATCCGCCGCTGCTCCATACGGTGCGCGGCGCGGGATACATCATCCGTGACGGCGTTCGGTAA

Protein sequence :
MSSNPTVASDSRRSHDGPVIDLADLRKAARDSAQEPAMRLLIVEDDRDAADYLRKAFREAGHVVDVASDGEEGLMLAREG
GYDVLLVDRMLPRRDGLALIAELRGRGDKTPALILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARVEALARRGGPQA
ADTVYRVADLELDRLAHRCTRAGQEIVLQPREFRLLEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKID
KGFDPPLLHTVRGAGYIIRDGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0125 Protein 1e-48 48
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0111 Protein 1e-54 48
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0347 Protein 1e-47 47
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0083 Protein 5e-47 47
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0308 Protein 6e-45 47
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0197 Protein 3e-46 47
Snov_0735 YP_003692685.1 two component transcriptional regulator BAC0638 Protein 5e-40 46
Snov_0735 YP_003692685.1 two component transcriptional regulator NC_002516.2.879194.p Protein 6e-30 42
Snov_0735 YP_003692685.1 two component transcriptional regulator AE000516.2.gene3505. Protein 8e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_0735 YP_003692685.1 two component transcriptional regulator VFG1390 Protein 2e-41 44
Snov_0735 YP_003692685.1 two component transcriptional regulator VFG1389 Protein 4e-35 44
Snov_0735 YP_003692685.1 two component transcriptional regulator VFG0596 Protein 2e-38 42