Gene Information

Name : Desdi_0824 (Desdi_0824)
Accession : YP_007219745.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 852600 - 853292 bp
Length : 693 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
GTGATACCTATCCAGAAGCTCAAAGGGATAAAAATCCTGATCATTGATGATGAGCCCAATATTTTAGAGTTCCTGGCCAT
GGGATTGCTGAACGAGGGGTTCGAGGTGCAGACAGCTCCCGACGGGATGGCTGGGATTACCTTAGCTAAGCAATTCCATC
CCCATATAATTATCTTGGATATTATGATGCCGGGTATGGACGGCTTTGAAGTGTGTCGTATGCTAAAAAAGCTGGAGCAG
GTCTCCATCATCATGTTGACCGCTAAAGATGATGTCGAGGATCGGGTGAAGGGTTTGAGGACGGGTGCCGATGATTATAT
GGCCAAGCCCTTTAGCTTCGAGGAGTTGCTAGCGCGCATCTATGCCCGGGTTCGCAATCAGTTCCCGCATCTTTTGGAAG
AGGTTACGGTAGGTCCTTTGCGCGTGGATGACCGACGCAAGGAAATCCTTTTTCATGATAAGGCCTTGGAACTATCTCCT
ACGGAATATGAACTGCTGAAGTTCATGATCCTTAACCAAGGGCTGGTGTTAAGCAAGTCGATGATTCTGGATAAGGTTTG
GGGTTATGATTTTGTCGGGGACGATAATATTGTCGAAGTGTATATTCGCTCCTTACGAGAAAAGCTGGGCGATAAAGAGC
ATCGCCTAATCCGCACCTTGCGGGGAGCCGGATATCGGATGGATTTGCTATGA

Protein sequence :
MIPIQKLKGIKILIIDDEPNILEFLAMGLLNEGFEVQTAPDGMAGITLAKQFHPHIIILDIMMPGMDGFEVCRMLKKLEQ
VSIIMLTAKDDVEDRVKGLRTGADDYMAKPFSFEELLARIYARVRNQFPHLLEEVTVGPLRVDDRRKEILFHDKALELSP
TEYELLKFMILNQGLVLSKSMILDKVWGYDFVGDDNIVEVYIRSLREKLGDKEHRLIRTLRGAGYRMDLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-37 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 6e-36 44
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 5e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 5e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 7e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 9e-36 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 3e-35 42
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-33 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-37 44
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 9e-38 43
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-34 41
Desdi_0824 YP_007219745.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 1e-32 41