Gene Information

Name : LPC_2578 (LPC_2578)
Accession : YP_001251839.1
Strain : Legionella pneumophila Corby
Genome accession: NC_009494
Putative virulence/resistance : Virulence
Product : two component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 889945 - 890616 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence :
ATGCGATTATTAATTGTTGAAGACCATAAAAGAACGGCTGATTTTATCTGTAAAGGATTTAATGAATATCAATTTCAGGC
AGATGCTGTATACGATGGTGCAGAAGCAATCTATCGAATCTCAGAAATTAACTACGATGCTGTTGTTTTAGACGTTATGT
TACCCATAATGGATGGATGGGCTGTACTTGAAAAGATTCGTGAACTAAAACCCGATTTACCTGTTTTAATGCTTTCTGCC
TGCGACGATGTCGATAGTCGTGTGAAAGGGCTTGAAATGGGTGCCTATGATTATCTTGTTAAACCTTTTTCCTTCAATGA
GCTCCTTGCCCGAGTAAAATCTTTACTACGAAGAAAACCCAAAGAGAGCCCTATCTTATTAAAGATTAATGATTTAACTA
TAAACTTACAAAAGCATACAGCAATACGAGGCGACAAAAAGTTACCTTTAACAGCAAAAGAATTCATGTTATTGACGTTT
ATGTTGAAACGAAGTGGTGAAGTGCTTTCAAGGACAGTCATTGCTGAACAAGTTTGGGATATTAATTTTGACACGAATAC
CAATATCATTGATGTAGCGATCAAGCGTTTAAGGGAAAAAGTGGATAATGATCATCCTACTAAATTGATCCATACCGTCA
GAGGAGTAGGCTATGTATTGGAGATTCGCTAA

Protein sequence :
MRLLIVEDHKRTADFICKGFNEYQFQADAVYDGAEAIYRISEINYDAVVLDVMLPIMDGWAVLEKIRELKPDLPVLMLSA
CDDVDSRVKGLEMGAYDYLVKPFSFNELLARVKSLLRRKPKESPILLKINDLTINLQKHTAIRGDKKLPLTAKEFMLLTF
MLKRSGEVLSRTVIAEQVWDINFDTNTNIIDVAIKRLREKVDNDHPTKLIHTVRGVGYVLEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-45 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-44 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPC_2578 YP_001251839.1 two component response regulator BAC0125 Protein 2e-55 53
LPC_2578 YP_001251839.1 two component response regulator BAC0197 Protein 7e-55 53
LPC_2578 YP_001251839.1 two component response regulator BAC0083 Protein 1e-54 51
LPC_2578 YP_001251839.1 two component response regulator BAC0111 Protein 5e-54 50
LPC_2578 YP_001251839.1 two component response regulator BAC0308 Protein 2e-55 50
LPC_2578 YP_001251839.1 two component response regulator BAC0638 Protein 2e-48 49
LPC_2578 YP_001251839.1 two component response regulator BAC0347 Protein 2e-48 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPC_2578 YP_001251839.1 two component response regulator VFG0596 Protein 1e-45 47
LPC_2578 YP_001251839.1 two component response regulator VFG1389 Protein 2e-33 42
LPC_2578 YP_001251839.1 two component response regulator VFG1390 Protein 4e-38 41