Gene Information

Name : colR (PSTAA_0858)
Accession : YP_005937510.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator ColR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 931927 - 932610 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTGGTCATTGAAGACAACCGTGACATCCTGGCCAACGTGCTCGACTACCTCGAGCTCAAGGGCTACCTGGT
GGACTGTGCGCAGGACGGGCTGAGTGGCCTGCACCTGGCCGCGACCCAGGAATACGACCTCATCGTGCTGGACATCATGC
TGCCCGGCATCGACGGCTATCAGGTGTGCAAGCGCCTGCGCGAAGACGCACGGCGCGACACGCCGATCATCATGCTCACC
GCGCGCGACGCCCTGCCGGATCGCATCAAGGGATTGGAAGCCGGCGCCGACGACTATCTGATCAAGCCCTTCGCGCTGTC
CGAACTGGTCGCCCGTATCGAGGCGGTGTTGCGTCGCAGCCAGGGTTCGCGGCGTCGCCAGCTGCAGGTCGGTGACCTGG
TCTATGACCTCGATACCCTGGCCGTCAGCCGCGGCGGTGTGCCGATCCGGCTCAACCCCATCGGCCACAAGCTGCTCGCC
ATCCTCATGCAGCGCAGCCCGGCGGTGGTGCGGCGCGAGGCGCTCGAGGAAGCCCTATGGGGCGACAACGTGCCCGACAG
CGACAGCCTGCGCAGCCACATCCACCAGCTGCGCCAGGCGCTGGACAAACCCTTCGAGCGGCCGCTGCTGCACACGGTGC
ATGGCGTCGGCTTCCGCCTGGCGGAGCAGAGCGATGCTCGCTAA

Protein sequence : 
MRILVIEDNRDILANVLDYLELKGYLVDCAQDGLSGLHLAATQEYDLIVLDIMLPGIDGYQVCKRLREDARRDTPIIMLT
ARDALPDRIKGLEAGADDYLIKPFALSELVARIEAVLRRSQGSRRRQLQVGDLVYDLDTLAVSRGGVPIRLNPIGHKLLA
ILMQRSPAVVRREALEEALWGDNVPDSDSLRSHIHQLRQALDKPFERPLLHTVHGVGFRLAEQSDAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-36 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_005937510.1 DNA-binding response regulator ColR BAC0125 Protein 8e-34 42
colR YP_005937510.1 DNA-binding response regulator ColR BAC0197 Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_005937510.1 DNA-binding response regulator ColR VFG0596 Protein 3e-36 44
colR YP_005937510.1 DNA-binding response regulator ColR VFG1389 Protein 5e-22 41