Gene Information

Name : CFSAN001992_04640 (CFSAN001992_04640)
Accession : YP_007470686.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 888160 - 888888 bp
Length : 729 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGTCGTATTCTATCGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGACATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATCCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTGTCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTTCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCCCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCATCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAAGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGCATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCTCCACCAGCCATGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAA

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLESDRKAP
GNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPAMLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 4e-111 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 4e-111 99
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 2e-110 98
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 2e-110 98
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 5e-110 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_04640 YP_007470686.1 transcriptional regulator VFG0491 Protein 1e-110 98