Gene Information

Name : Meso_0902 (Meso_0902)
Accession : YP_673464.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 992983 - 993657 bp
Length : 675 bp
Strand : +
Note : PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr7695 two-component response regulator

DNA sequence :
ATGAAGATATTGATCATCGAAGATGACCGCGAGGCGGCGAGCTTCCTCAAGAAAGCCTTTTCCGAAGCGGGGCATATCGC
GGATGTGGCGTCCGACGGAGAGGCCGGCTTTGCGCTTGCCGATGGGGGCAATTACGATGTGTTCGTGATCGATCGCATGC
TCCCGCGCCGCGACGGGCTCTCCGTGATTGCGGGATTGCGAGCGAACGGCAACACGACGCCGGCGCTTATCCTCTCTGCT
TTAGGGGAGGTGGACGACCGGGTGACCGGCCTTCGCGCGGGCGGCGATGATTATCTTACGAAACCTTACGCGTTCTCAGA
ATTGCTCGCCCGCGTGGAAGTGCTGAAACGTCGAGCGGGCACACGCGACGTGGAAACGCTTTATCGGGCCGGCGATCTGG
AACTGGACCGGCTGTCACACACGGTGCGCCGAGGCGGGCAGGAGATCACGCTGCAGCCGCGCGAGTTCAGGCTGCTGGAA
TATCTAATGCGCCATGCCGGCCAGGTGGTCACGCGCACCATGCTTCTGGAGAATGTCTGGGACTATCACTTCGATCCCCA
GACCAATGTGATCGATGTGCATGTCTCGCGCCTCAGAGGCAAGATCGAGAGGGGCTTCGACAAGCCCATTCTGCACACGG
TGCGCGGGGCGGGTTATATGATCCGGGCGGACTGA

Protein sequence :
MKILIIEDDREAASFLKKAFSEAGHIADVASDGEAGFALADGGNYDVFVIDRMLPRRDGLSVIAGLRANGNTTPALILSA
LGEVDDRVTGLRAGGDDYLTKPYAFSELLARVEVLKRRAGTRDVETLYRAGDLELDRLSHTVRRGGQEITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRGKIERGFDKPILHTVRGAGYMIRAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0111 Protein 8e-54 46
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0083 Protein 1e-45 45
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0347 Protein 5e-47 45
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0125 Protein 9e-48 44
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0308 Protein 6e-44 43
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0197 Protein 6e-44 43
Meso_0902 YP_673464.1 two component transcriptional regulator BAC0638 Protein 1e-36 43
Meso_0902 YP_673464.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_0902 YP_673464.1 two component transcriptional regulator VFG1389 Protein 2e-32 42
Meso_0902 YP_673464.1 two component transcriptional regulator VFG0596 Protein 1e-39 41
Meso_0902 YP_673464.1 two component transcriptional regulator VFG1390 Protein 3e-38 41