Gene Information

Name : SCAB_9751 (SCAB_9751)
Accession : YP_003486725.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1096147 - 1097640 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGCCGCCCTCGCCCACGACGACCTGCTCCGCCGCGCCGAGGAGCTGGACCTCCCCAGCCGGCACCACATCGACGG
GGCGGACGAACCGGGCGGGGGCGCATCCTTCGCCGTCGTGTCACCCCGCGACGGCAGGACCCTCGTCGAGGTGGCCGACG
CGCACGGCGCCGAGGTCGACCTGGCCGTGGCCGCCGCCCGCCGCGCCTTCGACCGCGGCCCCTGGCCCCGTATGGCCCCC
GCCGACCGCGGCCGGATCCTGCTGCGCGTCGCCGACCTCCTGGAGGAACGGCGCCGGGAGCTGGCCCTGACCATCACCCT
GGAGATGGGCAAGCCGTACGGGGAGGCGCACGACATCGAACTGCGCGCCGCGATCACCACCTTCCGCTGGTACGGGCAGC
TGGCGGACAAGCTCACCGACGAGTCGCCCCACACCGCCCCCGACGCCCTGGCCCTGGTCACCCGTGAACCCGCGGGTGTG
GTGGGCGCGGTGGTGCCGTGGAACTTCCCCCTGACCCTGGCGAGCTGGAAGGTCGCCCCGGCGCTGGCGGCGGGCTGCAC
GGTCGTCCTGAAGCCTTCGGAGAACTCCCCGCTGTCCGCCCTGCTGCTGGGCCGGATCGCCACCGAGGCCGGACTGCCGC
CGGGCGTCCTCAACGTCGTCACCGGTGACGGGCCGACCGCCGGGCGGGCCATCGGGCTCCACCCCGACGTGGACGTCCTG
GCCTTCACCGGCTCCACGGCCGTCGGCCGGCACTTCCTGCACTACGCCGCCGACTCCAACCTCAAGCGGGTCTGGCTGGA
ACTGGGCGGCAAGTCCCCCAACATCATCCTTCCCGACGCCCCCGACCTGGAGAAGGCGGCCGCCACCGCCGCCTGGGGCA
TCTTCTTCAACCAGGGCGAGATGTGCACGGCCCCCTCCCGGCTGCTGGTGCACTCCTCGGTCGCCGAACGCGTCACCGAG
GCCGTCGTCGCCCGCGCCCGGGAGCTGCGCGTCGGCGACCCGCTCGACCCGGCCACCGAGATGGGCGCCCTGGTCCGCGA
GGCGCACCTCGAACGGGTCCTCGGCCACATCGACGCGGGCGTCGGCGACGGCGCGCGGCTGCGGGCCGGCGGCGAACGCG
TCCTGGCCGAGACCGGCGGCAGCTATCTGCGGCCCACCGTCTTCGACCGGGTGGACCCCGGGATGCGGCTGGCCCGCGAG
GAGATCTTCGGCCCCGTCCTGTCCGTCCTGACCTTCGACGACCTCGACGAGGCGGTACGGCTCGCCAACGACACCGAGTA
CGGCCTCGCCGCCGGCCTGTGGACCTCCGACCTGTCCACCGCCCACCGCGTCTCCCGCGCCCTGCGGGCCGGCACGGTCT
GGGTGAACTGCTACGAGGAGGGCGACCTGACCGTCCCCTTCGGCGGCATGAAGCAGTCGGGCAACGGCCGCGACAAGTCC
GCCCACGCCATCGAGAAGTACACCGAACTGAAGACCACCTGGATCCAGCTGTGA

Protein sequence :
MPAALAHDDLLRRAEELDLPSRHHIDGADEPGGGASFAVVSPRDGRTLVEVADAHGAEVDLAVAAARRAFDRGPWPRMAP
ADRGRILLRVADLLEERRRELALTITLEMGKPYGEAHDIELRAAITTFRWYGQLADKLTDESPHTAPDALALVTREPAGV
VGAVVPWNFPLTLASWKVAPALAAGCTVVLKPSENSPLSALLLGRIATEAGLPPGVLNVVTGDGPTAGRAIGLHPDVDVL
AFTGSTAVGRHFLHYAADSNLKRVWLELGGKSPNIILPDAPDLEKAAATAAWGIFFNQGEMCTAPSRLLVHSSVAERVTE
AVVARARELRVGDPLDPATEMGALVREAHLERVLGHIDAGVGDGARLRAGGERVLAETGGSYLRPTVFDRVDPGMRLARE
EIFGPVLSVLTFDDLDEAVRLANDTEYGLAAGLWTSDLSTAHRVSRALRAGTVWVNCYEEGDLTVPFGGMKQSGNGRDKS
AHAIEKYTELKTTWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-107 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-73 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-73 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_9751 YP_003486725.1 aldehyde dehydrogenase VFG0082 Protein 1e-73 42